Job Description P62707 Confidence 99.96% Date Thu Jan 5 12:07:47 GMT 2012 Rank 34 Aligned Residues 147 % Identity 26% Template c3f2iD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:alr0221 protein; PDBTitle: crystal structure of the alr0221 protein from nostoc, northeast2 structural genomics consortium target nsr422. Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	L	V	L	V	R	H	G	E	S	Q	W	N	K	E	N	R	F	T	G	W	Y	D	V	D	L	S	E	K	G	V	S	E	A	K	A	A	G	K	L	L	K	E	E	G	Y	S	F	D	F	A	Y	T	S	V	L	K	R	A	I	H	T	L	W	N	V	L	D	E	L	D	Q	A	W	L	P	V	E	K
Query Conservation
Alig confidence																			.	.																																																												.	.
Template Conservation																			.	.																																																												.	.
Template Sequence		X	E	L	Y	L	I	R	H	G	I	A	E	A	Q	K	T	G	.	.	I	K	D	E	E	R	E	L	T	Q	E	G	K	Q	K	T	E	K	V	A	Y	R	L	V	K	L	G	R	Q	F	D	L	I	V	T	S	P	L	I	R	A	R	Q	T	A	E	I	L	L	A	S	G	L	S	C	Q	L	E	E	.	.
Template Known Secondary structure												B					S	S	.	.	S		G	G	G			B																		T	T				S						S	S													T	T	S		S					.	.
Template Predicted Secondary structure																			.	.																																																												.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	K	L	N	E	R	H	Y	G	A	L	Q	G	L	N	K	A	E	T	A	E	K	Y	G	D	E	Q	V	K	Q	W	R	R	G	F	A	V	T	P	P	E	L	T	K	D	D	E	R	Y	P	G	H	D	P	R	Y	A	K	L	S	E	K	E	L	P	L	T	E	S	L	A	L	T	I	D	R	V	I	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	H	L	A	P	N	G	N	I	.	.	.	.	.	F	N	W	L	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S	T	T				.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template SS confidence
																																																														77	.	.	80	.	.	.	.	.	.						.	.	.	90	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	W	N	E	T	I	L	P	R	M	K	S	G	E	R	V	I	I	A	A	H	G	N	S	L	R	A	L	V	K	Y	L	D	N	M	S	E	E	E	I	L	E	L	N	I	P	T	G	V	P	L	V	Y	E	F	D	E	N	F	K
Query Conservation
Alig confidence										.	.																													.	.
Template Conservation										.	.																													.	.
Template Sequence		Y	W	L	K	P	K	N	F	.	.	P	E	N	A	Q	I	A	I	V	G	H	E	P	C	L	S	N	W	T	E	I	L	L	W	G	E	A	K	.	.	D	S	L	V	L	K	K	A	G	X	I	G	L	K	L	P	E	I	G	S
Template Known Secondary structure			T							.	.		T	T									T	T											T	S	S			.	.							T	T									S	S	S
Template Predicted Secondary structure										.	.																													.	.
Template SS confidence
		92	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions