 |
Job Description | P75990 | Confidence | 36.70% | Date | Thu Jan 5 12:17:01 GMT 2012 |
Rank | 243 | Aligned Residues | 92 |
% Identity | 11% | Template | c3t6kB_ |
PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:response regulator receiver; |
PDBTitle: crystal structure of a hypothetical response regulator (caur_3799)2 from chloroflexus aurantiacus j-10-fl at 1.86 a resolution
|
Resolution | 1.86 Å |
|
 |
  |   |
283 | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | |
. |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Query Sequence |   |
S | R | F | D | E | F | A | E | A | I | K | S | L | K | A | A | G | I | S | V | A | I | D | H | F | G | A | G | F | A | G | L | L | L | L | S | R | F | Q | P | D | R | I | K | I | S | Q | E | L | I | T | N | V | H | K | S | G | P | R | Q | A | I | I | Q | A | I | I | K | C | C | T | S | L | E | I | Q | V | S | . |
A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|   |
|   |
|
|
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|
| . |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   | . | . |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |
| . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |
Template Sequence |   |
D | D | D | T | V | A | E | X | L | E | L | V | L | R | G | A | G | Y | E | . |
. |
V | R | R | A | A | S | G | E | E | A | L | Q | Q | I | Y | K | N | L | P | D | A | L | I | C | D | V | L | L | . |
. |
. |
. |
. |
P | G | I | D | G | Y | T | L | C | K | R | V | R | Q | H | P | L | T | K | T | L | P | I | L | X | L |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  | . | . |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  | S |
|
| . | . | . | . | . | S | S | S |
|  |  |  |  |  |  |  |  |  |  | S | G | G | G | T | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
| . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
362 | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | G | V | A | T | P | E | E | W | M | W | L | E | S | A | G | I | E | M | F |
Query Conservation |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
T | A | Q | G | D | I | S | A | K | I | A | G | F | E | A | G | A | N | D | Y |
Template Known Secondary structure |   |
 |
| T | T |
|  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|