Job Description P75990 Confidence 99.37% Date Thu Jan 5 12:17:01 GMT 2012 Rank 19 Aligned Residues 137 % Identity 12% Template c3ignA_ PDB info PDB header:transferase Chain: A: PDB Molecule:diguanylate cyclase; PDBTitle: crystal structure of the ggdef domain from marinobacter2 aquaeolei diguanylate cyclase complexed with c-di-gmp -3 northeast structural genomics consortium target mqr89a Resolution 1.83 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		L	T	T	L	I	Y	R	S	H	I	R	D	D	E	P	V	K	K	I	E	E	M	V	S	I	A	N	R	R	N	M	Q	S	D	V	T	G	I	L	L	F	N	G	S	H	F	F	Q	L	L	E	G	.	.	.	.	.	P	E	E	Q	V	K	M	I	Y	R	A	I	C	Q	D	P	R	H	Y	N	I	V	E
Query Conservation																																																						.	.	.	.	.
Alig confidence												.	.	.	.	.																			.	.	.																	.	.	.	.	.
Template Conservation												.	.	.	.	.																			.	.	.
Template Sequence		L	T	G	L	L	N	R	G	T	W	.	.	.	.	.	E	N	L	V	D	A	E	Y	E	R	F	R	R	Y	G	Q	A	T	.	.	.	S	L	V	X	F	D	I	D	H	F	K	P	V	N	D	T	Y	G	H	L	A	G	D	E	V	I	R	H	T	A	D	V	T	R	N	N	I	R	Q	S	D	S	A	G
Template Known Secondary structure		T	T		S							.	.	.	.	.																			.	.	.								T	T																										T	T	S		T	T	S
Template Predicted Secondary structure												.	.	.	.	.																			.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		77	.	.	80													.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Query Sequence		L	L	C	D	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	P	A	R	R	F	G	K	A	G	M	E	L	F	D	.	.	L	R	L	H	E	R	D	D	V	L	Q	A	V	F	D	K	G	T	S	K	F	Q	L	T	Y	D	D	R	A	L	Q	F	F	R	T	F	V	L	A	T	E	Q	S	T	Y	F
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		R	Y	G	G	E	E	F	G	I	I	L	P	E	T	D	A	E	S	A	R	V	I	C	E	R	I	R	E	A	I	E	K	S	T	V	S	T	S	A	G	D	I	Q	Y	T	V	S	X	G	I	A	Q	L	T	E	T	P	E	N	Y	X	Q	W	X	Q	K	A	D	E	A	L	Y	K	A	K	E	S	G	R	N
Template Known Secondary structure				S	S	S								T																			T						S	S																S			S	S																		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		143	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	V	V
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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