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Job DescriptionP75990
Confidence99.82%DateThu Jan 5 12:17:01 GMT 2012
Rank11Aligned Residues136
% Identity15%Templatec3ezuA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of multidomain protein of unknown function with2 ggdef-domain (np_951600.1) from geobacter sulfurreducens at 1.95 a3 resolution
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDY
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Template Sequence  LTGVXTRAGFF. . . . . KTVGSLAYAAQRSGSNV. . . GIXLIDLDYFKLVGQTGDRILQLVAETITSHLRRSDVVGRYDGD
Template Known Secondary structure  TT
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   186...190...... ...200.........210... ......220.........230.........240.........250.......
 
   82.......90.........100.........110... ......120.........130.........140......
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Query Sequence  . . . . . . . . . . . APARRFGKAGMELFDLRLHERDDVLQAVFDKG. . . TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPA
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Template Sequence  EFVVYLSPVEPASLRTVAENLRRSIEEESA. RXVPVTASIGVAQGILGTDVDGGIEELVRLADECLXQAKYTGKNKVVV
Template Known Secondary structure  SS

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   263......270.........280.........290.. .......300.........310.........320.........330.........340
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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