Job Description P39325 Confidence 87.78% Date Thu Jan 5 11:59:21 GMT 2012 Rank 120 Aligned Residues 152 % Identity 7% Template d2ajta2 SCOP info FucI/AraA N-terminal and middle domains FucI/AraA N-terminal and middle domains AraA N-terminal and middle domain-like Resolution 2.60

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.											.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		A	P	L	T	V	G	F	S	Q	V	G	S	E	S	G	W	R	A	A	E	T	N	V	A	K	S	E	A	E	K	.	.	.	.	.	.	.	.	.	.	R	G	I	T	L	K	I	A	D	G	Q	Q	K	Q	E	N	Q	I	K	A	V	R	S	F	V	A	Q	G	.	V	D	A	I	F	I	A	P	V	V	A
Query Conservation																																.	.	.	.	.	.	.	.	.	.																													.
Alig confidence													.																			.	.	.	.	.	.	.	.	.	.																													.
Template Conservation													.
Template Sequence		D	N	Y	E	V	W	F	V	I	G	S	.	Q	H	L	Y	G	P	E	T	L	R	Q	V	T	Q	H	A	E	H	V	V	N	A	L	N	T	E	A	K	L	P	C	K	L	V	L	K	P	L	G	T	T	P	D	E	I	T	A	I	C	R	D	A	N	Y	D	D	P	C	A	G	L	V	V	W	L	H	T	F
Template Known Secondary structure		G	G										.		T	T	S																							S			S	S								B		S															T	T										S
Template Predicted Secondary structure													.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	W	E	P	V	L	K	E	A	K	D	A	E	I	P	V	F	L	L	D	R	S	I	D	V	K	D	K	S	L	Y	M	T	T	V	T	A	D	N	I	L	E	G	K	L	I	G	D	W	L	V	K	E	V	N	G	K	P	C	N	V	V	E	L	Q	G	T	V	G	A	S	V	A	I	D	R	K	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	A	K	M	W	I	N	G	L	T	M	L	N	K	P	L	L	Q	F	H	T	Q	F	N	A	A	L	P	W	D	S	I	D	M	D	F	M	N	L	N	Q	T	A	H	G	G	R	E	F	G	F	I	G	A	R	M	R	Q	Q	H	A	V	V	T	G	H	W	Q	D	K	Q	A	H	E	R	I	G	S	W
Template Known Secondary structure																S									S	S	S	S			T	T	T							T	S																	T	T								S		T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		171	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	R	Q	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions