Return to main results Retrieve Phyre Job Id

Job DescriptionP39325
Confidence84.72%DateThu Jan 5 11:59:21 GMT 2012
Rank123Aligned Residues107
% Identity11%Templated1gtza_
SCOP infoFlavodoxin-like Type II 3-dehydroquinate dehydratase Type II 3-dehydroquinate dehydratase
Resolution1.6

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100... ......110.....
Predicted Secondary structure 



















..






Query SS confidence 

































































. .











Query Sequence  RAAETNVAKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDA. . EIPVFLLDRSID
Query Conservation        

   
   
  
       
       
  
    




                   .. 
 
        
Alig confidence 

























.












.
























..











Template Conservation 
  
       
   
      


 .

 


 
  
  .  








 






 


      
 







Template Sequence  LADVEALCVKAAAAHGGTVDFRQSNH. EGELVDWIHEARL. NHCGIVINPAAYSHTSVAILDALNTCDGLPVVEVHISNI
Template Known Secondary structure  TTT


S
..
S
TT
TSTT

SS
G
Template Predicted Secondary structure 





.
.














Template SS confidence 















































































   33......40.........50........ .60.........70. ........80.........90.........100.........110
 
   116...120......... 130.........140......
Predicted Secondary structure 











.........

Query SS confidence 













. . . . . . . . .
















Query Sequence  VKDKSLYMTTVTAD. . . . . . . . . NILEGKLIGDWLVKEVN
Query Conservation                .........           
     
Alig confidence 













.........
















Template Conservation   


 


 
 

  
 
 
 
 
  

 


 

  
 
Template Sequence  HQREPFRHHSYVSQRADGVVAGCGVQGYVFGVERIAALAG
Template Known Secondary structure  GGS
GGGS

SGGGT
SSSTT
Template Predicted Secondary structure 


















Template SS confidence 







































   111........120.........130.........140.........150
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions