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Job DescriptionP39325
Confidence93.93%DateThu Jan 5 11:59:21 GMT 2012
Rank101Aligned Residues122
% Identity11%Templatec3u80A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:3-dehydroquinate dehydratase, type ii; PDBTitle: 1.60 angstrom resolution crystal structure of a 3-dehydroquinate2 dehydratase-like protein from bifidobacterium longum
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
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Query Sequence  LTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDA
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Template Sequence  TKVIVVNGPNLRQDLDTLRKLCAEWGKDLGLEVEVRQTDD. EAEMVRWMHQAAD. EKTPVVMNPAAFTHYSYALADAAHM
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   2.......10.........20.........30.........40. ........50.... .....60.........70.........
 
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Query Sequence  . . . . EIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNG
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Template Sequence  VIDENLPLMEVHISNPSVISPVATGTITGMGFYGYKLALDAVAHLLSE
Template Known Secondary structure  TT

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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