Job Description P39325 Confidence 98.28% Date Thu Jan 5 11:59:21 GMT 2012 Rank 75 Aligned Residues 209 % Identity 14% Template c3sg0A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: the crystal structure of an extracellular ligand-binding receptor from2 rhodopseudomonas palustris haa2 Resolution 1.20 Å

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		21	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure													.	.																							.	.	.
Query SS confidence													.	.																							.	.	.
Query Sequence		A	A	P	L	T	V	G	F	S	Q	V	.	.	G	S	E	S	G	W	R	A	A	E	T	N	V	A	K	S	E	A	E	K	R	G	.	.	.	I	T	L	K	I	A	D	G	Q	Q	K	Q	E	N	Q	I	K	A	V	R	S	F	V	A	Q	G	V	D	A	I	F	I	A	P	V	V	A	T	G	W	E	P
Query Conservation													.	.																							.	.	.
Alig confidence													.	.																							.	.	.
Template Conservation
Template Sequence		Q	A	E	I	K	I	G	I	T	X	S	A	S	G	P	G	A	A	L	G	Q	P	Q	S	K	T	V	A	A	L	P	K	E	I	G	G	E	K	V	T	Y	F	A	L	D	D	E	S	D	P	T	K	A	A	Q	N	A	R	K	L	L	S	E	E	K	V	D	V	L	I	G	S	S	L	T	P	V	S	L	P
Template Known Secondary structure														S	S	T	T											G	G	G	S		S			T	T											T	T															T	S			S						S	S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		V	L	K	E	A	K	D	A	E	I	P	V	F	L	L	D	R	S	I	D	V	.	.	.	.	K	D	K	S	L	Y	M	T	T	V	T	A	D	N	I	L	E	G	K	L	I	G	D	W	L	V	K	E	V	N	G	K	P	C	N	V	V	E	L	Q	G	T	V	G	A	S	V	A	I	D	R	K	K	G	F
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.																																					.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		L	I	D	I	A	A	E	A	K	T	P	L	X	T	X	A	A	A	A	I	L	V	A	P	X	D	E	R	R	K	W	V	Y	K	V	V	P	N	D	D	I	X	A	E	A	I	G	K	Y	I	A	K	T	G	A	K	K	V	G	Y	I	.	.	.	.	.	G	F	S	D	A	Y	G	E	G	Y	Y	K	V	L
Template Known Secondary structure									T	T										G	G	G	T		S			T	T	G	G	G					S																	T	T								.	.	.	.	.			S	S
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	I	K	N	A	P	N	I	K	I	I	R	S	Q	S	G	D	F	T	R	S	K	G	K	E	V	M	E	S	F	I	K	A	E	N	N	G	K	N	I	C	M	V	Y	A	H	N	D	D	M	V	I	G	A	I	Q	A	I	K	E	A	G	L	K	P	G
Query Conservation
Alig confidence																									.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		A	A	A	A	P	K	L	G	F	E	L	T	T	H	E	V	Y	A	R	S	D	A	S	.	.	.	.	.	V	T	G	Q	V	L	K	I	I	A	T	K	P	D	A	V	F	I	A	S	A	G	T	P	A	V	L	P	Q	K	A	L	R	E	R	G	F	K	G	A
Template Known Secondary structure									T											T	T		S		.	.	.	.	.											T			S								S	G	G	G										T	T			S
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions