Job Description P39325 Confidence 99.65% Date Thu Jan 5 11:59:21 GMT 2012 Rank 71 Aligned Residues 238 % Identity 16% Template c3s99A_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:basic membrane lipoprotein; PDBTitle: crystal structure of a basic membrane lipoprotein from brucella2 melitensis, iodide soak Resolution 2.05 Å

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		23	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																					.	.
Query SS confidence													.	.																					.	.
Query Sequence		P	L	T	V	G	F	S	Q	V	G	S	.	.	E	S	G	W	R	A	A	E	T	N	V	A	K	S	E	A	E	K	R	G	.	.	I	T	L	K	I	A	D	G	Q	Q	K	Q	E	N	Q	I	K	A	V	R	S	F	V	A	Q	G	V	D	A	I	F	I	A	P	V	V	A	T	G	W	E	P	V	L	K
Query Conservation													.	.																					.	.
Alig confidence													.	.																					.	.
Template Conservation
Template Sequence		K	L	K	V	G	F	I	Y	I	G	P	P	G	D	F	G	W	T	Y	Q	H	D	Q	A	R	K	E	L	V	E	A	L	G	D	K	V	E	T	T	F	L	E	N	V	A	E	G	A	D	A	E	R	S	I	K	R	I	A	R	A	G	N	K	L	I	F	T	T	S	F	G	Y	M	D	P	T	V	K	V	A
Template Known Secondary structure										S	S		G	G	G	S	S																	T	T	T								S			T	T													T	T		S						S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	K	D	A	E	I	P	V	F	L	L	D	R	S	I	D	V	K	D	K	S	L	Y	M	T	T	V	T	A	D	N	I	L	E	G	K	L	I	G	D	W	L	V	K	E	V	N	G	K	P	C	N	V	V	E	L	Q	G	T	V	G	A	S	V	A	I	D	R	K	K	G	F	A	E	A	I	K	N	A
Query Conservation
Alig confidence					.																.	.	.	.																												.	.
Template Conservation					.																.	.	.	.																												.	.
Template Sequence		K	K	F	.	P	D	V	K	F	E	H	A	T	G	Y	K	T	A	D	.	.	.	.	N	M	S	A	Y	N	A	R	F	Y	E	G	R	Y	V	Q	G	V	I	A	A	K	M	S	K	K	G	.	.	I	A	G	Y	I	G	S	V	P	V	P	E	V	V	Q	G	I	N	S	F	M	L	G	A	Q	S	V	N
Template Known Secondary structure		T	T		.	T	T	S						S					B	T	.	.	.	.	T																								S	S		.	.																										T	T
Template Predicted Secondary structure					.																.	.	.	.																												.	.
Template SS confidence
		100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		P	N	I	K	I	I	R	S	Q	S	G	D	F	.	T	R	S	K	G	K	E	V	M	E	S	F	I	K	A	E	N	N	G	K	N	I	C	M	V	Y	A	H	N	D	D	M	V	I	G	A	I	Q	A	I	K	E	A	G	L	K	P	G	K	D	I	L	T	G	S	I	D	G	V	P	D	I	Y	K	A	M
Query Conservation															.
Alig confidence															.																.	.	.	.	.													.	.													.	.	.	.	.	.									.	.
Template Conservation																															.	.	.	.	.													.	.													.	.	.	.	.	.									.	.
Template Sequence		P	D	F	R	V	K	V	I	W	V	N	S	W	F	D	P	G	K	E	A	D	A	A	K	A	L	I	D	Q	.	.	.	.	.	G	V	D	I	I	T	Q	H	T	D	S	T	.	.	A	A	I	Q	V	A	H	D	R	G	I	K	.	.	.	.	.	.	A	F	G	Q	A	S	D	M	.	.	I	K	F	A
Template Known Secondary structure		T	T									S	S	S																T	.	.	.	.	.	T		S					S	S	S	S	S	.	.									T	T			.	.	.	.	.	.						S			.	.	G	G	G	S
Template Predicted Secondary structure																															.	.	.	.	.													.	.													.	.	.	.	.	.									.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.			.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	G	E	A	N	A	S	V	E	L	T	P	N	M	A	G	P	A	F	D	A	L	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	T	Q	L	T	A	V	V	D	E	W	G	P	Y	Y	I	D	R	A	K	A	V	L	D
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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