Job Description P39325 Confidence 23.98% Date Thu Jan 5 11:59:21 GMT 2012 Rank 245 Aligned Residues 117 % Identity 9% Template c3rggD_ PDB info PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase, pure protein; PDBTitle: crystal structure of treponema denticola pure bound to air Resolution 1.82 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.																											.
Query SS confidence																																	.	.																											.
Query Sequence		P	L	T	V	G	F	S	Q	V	G	S	E	S	G	W	R	A	A	E	T	N	V	A	K	S	E	A	E	K	R	G	.	.	I	T	L	K	I	A	D	G	Q	Q	K	Q	E	N	Q	I	K	A	V	R	S	F	V	A	Q	G	.	V	D	A	I	F	I	A	P	V	V	A	T	G	W	E	P	V	L	K	E
Query Conservation																																	.	.																											.
Alig confidence																	.	.	.														.	.																											.
Template Conservation																	.	.	.
Template Sequence		R	P	L	V	I	I	L	M	G	S	S	S	D	M	G	.	.	.	H	A	E	K	I	A	S	E	L	K	T	F	G	I	E	Y	A	I	R	I	G	S	A	H	K	T	A	E	H	V	V	S	M	L	K	E	Y	E	A	L	D	R	P	K	L	Y	I	T	I	A	G	R	S	N	A	L	S	G	F	V	D	G
Template Known Secondary structure										S	S	G	G	G			.	.	.												T	T										T	T	T														T	S	S	S										S	S
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.
Query Sequence		A	K	D	A	E	I	P	V	F	L	L	D	R	S	I	.	.	.	.	.	.	.	D	V	K	D	K	S	L	Y	M	T	T	V	T	A	D	N	I	L	E	G	K	L	I	G	D	W	L	V
Query Conservation																	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	K	G	A	T	I	A	C	P	P	P	S	D	S	F	A	G	A	D	I	Y	S	S	L	R	M	P	S	G	I	S	P	A	L	V	L	E	P	K	N	A	A	L	L	A	A	R	I	F
Template Known Secondary structure			S	S	S											G	G	G	G	G	G	G								T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions