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Job Description | P39325 | Confidence | 43.58% | Date | Thu Jan 5 11:59:21 GMT 2012 |
Rank | 186 | Aligned Residues | 87 |
% Identity | 14% | Template | c3lerA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:dihydrodipicolinate synthase; |
PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168
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Resolution | 1.84 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
G | F | S | Q | V | G | S | E | S | G | W | . |
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R | A | A | E | T | N | V | A | K | S | E | A | E | K | R | G | I | T | L | K | I | A | D | G | Q | Q | K | Q | E | N | Q | I | K | A | V | R | S | F | V | A | Q | G | V | D | A | I | F | I | A | P | V | V | A | T | G | W | E | P | V | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | V | V | P | V | G | T | T | G | E | S | A | T | L | T | H | E | E | H | R | T | C | I | E | I | A | V | E | T | C | K | G | T | K | V | K | V | L | A | G | A | G | S | N | A | T | H | E | A | V | G | L | A | K | F | A | K | E | H | G | A | D | G | I | L | S | V | A | P | Y | Y | N | K | P | T | Q | Q | G | L | Y |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
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97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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L | K | E | A | K | D | A | E | I | P | V | F | L | L | D | R | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | H | Y | K | A | I | A | Q | S | V | D | I | P | V | L | L | Y | N | V | P |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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