Return to main results Retrieve Phyre Job Id

Job DescriptionP39325
Confidence38.01%DateThu Jan 5 11:59:21 GMT 2012
Rank197Aligned Residues86
% Identity19%Templatec3lciA_
PDB info PDB header:lyaseChain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30....... ..40.........50.........60.........70.........80......... 90....
Predicted Secondary structure 




.......














.....



Query SS confidence 










. . . . . . .



















































. . . . .




Query Sequence  GFSQVGSESGW. . . . . . . RAAETNVAKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVV. . . . . ATGWE
Query Conservation 


       
.......      

   
   
  
       
       
  
    




     .....     
Alig confidence 










.......













.




































.....




Template Conservation 

   




   

  

  
          .   

 

   
  
 
  
  
   


 
 
  
 
   
   
 
Template Sequence  GLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG. KIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHC
Template Known Secondary structure  SSGGGTGGGS
TT.TS


SST
S


SS


Template Predicted Secondary structure 










.


















Template SS confidence 















































































   41........50.........60.........70.. .......80.........90.........100.........110.........
 
   95....100... ......110...
Predicted Secondary structure 
..




Query SS confidence 








. .









Query Sequence  PVLKEAKDA. . EIPVFLLDRS
Query Conservation           .. 
 
      
Alig confidence 








..









Template Conservation       
       

 


 
Template Sequence  DHYRAIIDSADGLPMVVYNIP
Template Known Secondary structure  TTT


Template Predicted Secondary structure 






Template SS confidence 




















   120.........130.........140
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions