Job Description P39325 Confidence 100.00% Date Thu Jan 5 11:59:21 GMT 2012 Rank 33 Aligned Residues 270 % Identity 13% Template c3kkeA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:laci family transcriptional regulator; PDBTitle: crystal structure of a laci family transcriptional regulator2 from mycobacterium smegmatis Resolution 2.20 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	G	F	S	Q	V	G	S	E	S	G	W	R	A	A	E	T	N	V	A	K	S	E	A	E	K	R	G	I	T	L	K	I	A	D	G	Q	Q	K	Q	E	N	Q	I	K	A	V	R	S	F	V	A	Q	G	V	D	A	I	F	I	A	P	V	V	A	T	G	W	E	P	V	L	K	E	A	K	D	A	E
Query Conservation
Alig confidence																																																																					.	.
Template Conservation																																																																					.	.
Template Sequence		T	I	G	L	I	V	P	D	V	N	N	A	V	F	A	D	M	F	S	G	V	Q	M	A	A	S	G	H	S	T	D	V	L	L	G	Q	I	D	A	P	P	R	G	T	Q	Q	L	S	R	L	V	S	E	G	R	V	D	G	V	L	L	Q	R	R	E	D	F	.	.	D	D	D	M	L	A	A	V	L	E	G
Template Known Secondary structure								S		T	T	S	T	T															T	T										S	T	T												S		S	S	S								T	T		.	.										T	T
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		I	P	V	F	L	L	D	R	S	I	D	V	K	D	K	S	L	Y	M	T	T	V	T	A	D	N	I	L	E	G	K	L	I	G	D	W	L	V	K	E	V	N	G	K	P	C	N	V	V	E	L	Q	G	T	V	G	A	S	V	A	I	D	R	K	K	G	F	A	E	A	I	K	N	A	P	N	I	K	.	I
Query Conservation																																																																																.
Alig confidence											.	.	.	.	.																														.	.	.																																	.
Template Conservation											.	.	.	.	.																														.	.	.
Template Sequence		V	P	A	V	T	I	N	S	R	.	.	.	.	.	V	P	G	R	V	G	S	V	I	L	D	D	Q	K	G	G	G	I	A	T	E	H	L	I	T	L	G	H	S	.	.	.	R	I	A	F	I	S	G	T	A	I	H	D	T	A	Q	R	R	K	E	G	Y	L	E	T	L	A	S	A	G	L	R	S	E	A
Template Known Secondary structure		S						S			.	.	.	.	.		T	T																							T	T			.	.	.	S						S		S	S																		T	T					G
Template Predicted Secondary structure											.	.	.	.	.																														.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		I	R	S	Q	S	G	D	F	T	R	S	K	G	K	E	V	M	E	S	F	I	K	A	E	.	.	N	N	G	K	N	I	C	M	V	Y	A	H	N	D	D	M	V	I	G	A	I	Q	A	I	K	E	A	G	L	K	P	G	K	D	I	L	T	G	S	I	D	G	V	P	D	I	Y	K	A	M	M	D	G	E
Query Conservation																										.	.
Alig confidence																										.	.																																													.	.
Template Conservation																																																																								.	.
Template Sequence		A	W	V	V	D	A	G	W	E	A	D	A	G	S	A	A	L	N	T	L	Y	R	G	A	N	L	G	K	P	D	G	P	T	A	V	V	V	A	S	V	N	A	A	V	G	A	L	S	T	A	L	R	L	G	L	R	V	P	E	D	L	S	I	V	G	I	N	T	T	W	.	.	V	S	D	T	V	Y	P	A
Template Known Secondary structure		G	G						S	S																	T	T	S	T	T	S		S					S	S														T	T			T	T	T	T							S				.	.					S	S	S
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		A	N	A	S	V	E	L	T	P	N	M	A	G	P	A	F	D	A	L	E	K	Y	K	K	D	G	T	M	P	E	K	L	T	.	L	T	K	S	T	L	Y	L	P	D	T	A
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		L	T	T	V	R	L	P	L	Q	R	L	G	E	V	A	A	D	V	L	M	E	H	L	G	G	R	A	L	T	D	T	V	V	T	Q	P	T	P	E	L	L	V	R	E	T	T
Template Known Secondary structure																									T	T										S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions