Job Description P39325 Confidence 56.51% Date Thu Jan 5 11:59:21 GMT 2012 Rank 162 Aligned Residues 61 % Identity 18% Template c3k2dA_ PDB info PDB header:immune system Chain: A: PDB Molecule:abc-type metal ion transport system, periplasmic component; PDBTitle: crystal structure of immunogenic lipoprotein a from vibrio vulnificus Resolution 2.60 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	A	P	L	T	V	G	F	S	Q	V	G	S	E	S	G	W	R	A	A	E	T	N	V	A	K	S	E	A	E	K	R	G	I	T	L	K	I	A	D	G	Q	Q	K	Q	E	N	Q	I	K	A	V	R	S	F	V	A	Q	G	V	D	A	I	F	I	A	P
Query Conservation
Alig confidence													.																	.	.	.																	.	.	.	.
Template Conservation													.																	.	.	.																	.	.	.	.
Template Sequence		M	D	T	S	K	V	K	V	G	V	M	.	A	G	A	E	A	Q	V	A	E	V	A	A	K	V	A	K	.	.	.	E	K	Y	G	L	D	V	E	L	V	T	F	T	D	Y	V	.	.	.	.	T	P	N	A	A	L	D	D	G	S	I	D	M	N	A	F	Q	H
Template Known Secondary structure		S											.	T	T															.	.	.													S		T	T	.	.	.	.	S								T	S		S
Template Predicted Secondary structure													.																	.	.	.																	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions