Job Description P39325 Confidence 100.00% Date Thu Jan 5 11:59:21 GMT 2012 Rank 18 Aligned Residues 268 % Identity 14% Template c3h5oB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator gntr; PDBTitle: the crystal structure of transcription regulator gntr from2 chromobacterium violaceum Resolution 2.30 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	G	F	S	Q	V	G	S	E	S	G	W	R	A	A	E	T	N	V	A	K	S	E	A	E	K	R	G	I	T	L	K	I	A	D	G	Q	Q	K	Q	E	N	Q	I	K	A	V	R	S	F	V	A	Q	G	V	D	A	I	F	I	A	P	V	V	A	T	G	W	E	P	V	L	K	E	A	K	D	A
Query Conservation
Alig confidence																																																																						.	.
Template Conservation																																																																						.	.
Template Sequence		R	T	V	L	V	L	I	P	S	L	A	N	T	V	F	L	E	T	L	T	G	I	E	T	V	L	D	A	A	G	Y	Q	X	L	I	G	N	S	H	Y	D	A	G	Q	E	L	Q	L	L	R	A	Y	L	Q	H	R	P	D	G	V	L	I	T	G	L	S	H	A	.	.	E	P	F	E	R	I	L	S	Q	H
Template Known Secondary structure									S		S	T	T		T	T														T	T									T	T														T	T			S						S	S				.	.	T	T								T
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		E	I	P	V	F	L	L	D	R	S	I	D	V	K	D	K	S	L	Y	M	T	T	V	T	A	D	N	I	L	E	G	K	L	I	G	D	W	L	V	K	E	V	N	G	K	P	C	N	V	V	E	L	Q	G	T	V	G	A	S	V	A	I	D	R	K	K	G	F	A	E	A	I	K	N	A	.	.	P	N	I
Query Conservation																																																																													.	.
Alig confidence															.	.	.	.	.																																.	.	.	.																							.	.
Template Conservation															.	.	.	.	.																																.	.	.	.
Template Sequence		A	L	P	V	V	Y	X	X	D	L	A	D	D	.	.	.	.	.	G	R	C	C	V	G	F	S	Q	E	D	A	G	A	A	I	T	R	H	L	L	S	R	G	K	R	R	I	G	F	L	.	.	.	.	G	A	Q	L	D	E	R	V	X	K	R	L	D	G	Y	R	A	A	L	D	A	A	D	C	R	D	A
Template Known Secondary structure		T								S			S	S	.	.	.	.	.	S																						T	T			S					.	.	.	.			S																				T				G
Template Predicted Secondary structure															.	.	.	.	.																																.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	I	R	S	Q	S	G	D	F	T	R	S	K	G	K	E	V	M	E	S	F	I	K	A	E	N	N	G	K	N	I	C	M	V	Y	A	H	N	D	D	M	V	I	G	A	I	Q	A	I	K	E	A	G	L	K	P	G	K	D	I	L	T	G	S	I	D	G	V	P	D	I	Y	K	A	M	M	D	G	E
Query Conservation
Alig confidence																											.	.	.																																											.	.
Template Conservation																											.	.	.																																											.	.
Template Sequence		G	L	E	W	L	D	P	Q	P	S	S	X	Q	X	G	A	D	X	L	D	R	A	L	A	E	.	.	.	R	P	D	C	D	A	L	F	C	C	N	D	D	L	A	I	G	A	L	A	R	S	Q	Q	L	G	I	A	V	P	E	R	L	A	I	A	G	F	N	D	L	Q	.	.	P	A	A	W	C	T	P	P
Template Known Secondary structure		G	G						S																		.	.	.		T	T							S	S														T	T			T	T	T	T						S	B				.	.				T	S	S	S
Template Predicted Secondary structure																											.	.	.																																											.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	A	S	V	E	L	T	P	N	M	A	G	P	A	F	D	A	L	E	K	Y	K	K	D	G	T	M	P	E	K	L	T	L	T	K	S	T	L	Y	L	P	D	T	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	T	V	A	T	P	R	R	D	I	G	V	H	A	A	K	A	L	L	Q	L	I	D	G	E	E	P	A	S	R	R	A	D	L	G	F	R	L	X	L	R	R	S	S	E
Template Known Secondary structure			B																						T	T				S		S
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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