Job Description P39325 Confidence 26.89% Date Thu Jan 5 11:59:21 GMT 2012 Rank 235 Aligned Residues 86 % Identity 16% Template c3fluD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis Resolution 2.00 Å

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		27	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.						.	.	90	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.																																																			.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.																																																			.	.	.	.	.
Query Sequence		G	F	S	Q	V	G	S	E	S	G	W	.	.	.	.	.	.	.	R	A	A	E	T	N	V	A	K	S	E	A	E	K	R	G	I	T	L	K	I	A	D	G	Q	Q	K	Q	E	N	Q	I	K	A	V	R	S	F	V	A	Q	G	V	D	A	I	F	I	A	P	.	.	.	.	.	V	V	A	T	G	W	E
Query Conservation													.	.	.	.	.	.	.																																																			.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.													.																																						.	.	.	.	.
Template Conservation																																.
Template Sequence		G	I	V	A	V	G	T	T	G	E	S	A	T	L	S	V	E	E	H	T	A	V	I	E	A	V	V	K	H	V	.	A	K	R	V	P	V	I	A	G	T	G	A	N	N	T	V	E	A	I	A	L	S	Q	A	A	E	K	A	G	A	D	Y	T	L	S	V	V	P	Y	Y	N	K	P	S	Q	E	G	I	Y
Template Known Secondary structure						S	S	T	T	T	T	G	G	G	S																	.	T	T	S	S									S	S															T		S									S	S
Template Predicted Secondary structure																																.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		P	V	L	K	E	A	K	D	A	.	E	I	P	V	F	L	L	D	R	S
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		Q	H	F	K	T	I	A	E	A	T	S	I	P	M	I	I	Y	N	V	P
Template Known Secondary structure										T			S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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