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Job DescriptionP39325
Confidence100.00%DateThu Jan 5 11:59:21 GMT 2012
Rank12Aligned Residues281
% Identity26%Templatec2x7xA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sensor protein; PDBTitle: fructose binding periplasmic domain of hybrid two component2 system bt1754
Resolution2.64 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   24.....30.........40.........50.. .......60.........70.........80.........90.........100..
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Query Sequence  LTVGFSQVGSESGWRAAETNVAKSEAEKR. GITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKD
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Template Sequence  FRIGVAQCS. DDSWRHKMNDEILREAMFYNGVSVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISANEAAPMTPIVEEAYQ
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   33......40. ........50.........60.........70.........80.........90.........100.........110.
 
   103......110.........120.........130.........140.........150.........160.........170.........180..
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Query Sequence  AEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAPNIK
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Template Sequence  KGIPVILVDRK. . . . ILSDKYTAYIGADNYEIGRSVGNYIASSLKGKGNIVELTGLSGSTPAMERHQGFMAAISKFPDIK
Template Known Secondary structure  TT

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   112.......120.. .......130.........140.........150.........160.........170.........180.......
 
   183......190.........200.........210.........220.........230.........240......... 250.........
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Query Sequence  IIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGKDILTGSIDG. . . VPDIYKAMMD
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Template Sequence  LIDKADAAWERGPAEIEMDSMLRR. . . HPKIDAVYAHNDRIAPGAYQAAKMAG. . REKEMIFVGIDALPGKGNGLELVLD
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   188.190.........200.........210. ........220.........230....... ..240.........250.........260..
 
   260.........270.........280.........290.........300.........310......
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Query Sequence  GEANASVELTPNMAGPAFDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNM
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Template Sequence  SVLDATFIYPT. NGDKVLQLAMDILE. KKPYPKETVMNTAVVDRTNAHVMQLQTTHI
Template Known Secondary structure  TS
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   263......270... ......280....... ..290.........300.........310.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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