Job Description P39325 Confidence 87.46% Date Thu Jan 5 11:59:21 GMT 2012 Rank 121 Aligned Residues 221 % Identity 15% Template c2e4zA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:metabotropic glutamate receptor 7; PDBTitle: crystal structure of the ligand-binding region of the group iii2 metabotropic glutamate receptor Resolution 3.30 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.													.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.					.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.					.	.
Query Sequence		S	S	M	A	L	A	A	P	L	T	V	G	F	S	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	G	S	E	S	G	W	R	A	A	E	T	N	V	A	K	S	E	A	E	K	R	.	.	.	.	.	.	.	.	G	I	T	L	.	.	K	I	A	D	G	Q	Q	K	Q	E	N	Q	I	K	A	V	R
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.					.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.					.	.
Template Conservation
Template Sequence		H	S	I	R	I	E	G	D	V	T	L	G	G	L	F	P	V	H	A	K	G	P	S	G	V	P	C	G	D	I	K	R	E	N	G	I	H	R	L	E	A	M	L	Y	A	L	D	Q	I	N	S	D	P	N	L	L	P	N	V	T	L	G	A	R	I	L	D	T	C	S	R	D	T	Y	A	L	E	Q	S	L
Template Known Secondary structure									S														S	S	S		S																											S	S	S	S	S	S											T	T									G	G
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		74	.	.	.							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.																																								.	.	.
Query SS confidence						.	.	.	.	.	.																																								.	.	.
Query Sequence		S	F	V	A	.	.	.	.	.	.	Q	G	V	D	A	I	F	I	A	P	V	V	A	T	G	W	E	P	V	L	K	E	A	K	D	A	E	I	P	V	F	L	L	D	R	S	I	D	V	.	.	.	K	D	K	S	L	Y	M	T	T	V	T	A	D	N	I	L	E	G	K	L	I	G	D	W	L	V	K	E
Query Conservation						.	.	.	.	.	.																																								.	.	.
Alig confidence						.	.	.	.	.	.							.																																	.	.	.
Template Conservation																		.
Template Sequence		T	F	V	Q	A	L	I	Q	K	P	E	K	V	V	G	V	.	I	G	A	S	G	S	S	V	S	I	M	V	A	N	I	L	R	L	F	Q	I	P	Q	I	S	Y	A	S	T	A	P	E	L	S	D	D	R	R	Y	D	F	F	S	R	V	V	P	P	D	S	F	Q	A	Q	A	M	V	D	I	V	K	A	L
Template Known Secondary structure		G	G	G	G	G	G											.				S	S								T	T					T	T						S	S				G	G	G	G		T	T	T	T	S	S				S	S																	T
Template Predicted Secondary structure																		.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	G	K	P	C	N	V	V	E	L	Q	G	T	V	G	A	S	V	A	I	D	R	K	K	G	F	A	E	A	I	K	N	A	P	N	I	K	I	I	R	S	Q	S	G	D	F	T	R	S	K	G	K	E	V	M	E	S	F	I	K	A	E	N	N	G	K	N	I	C	M	V	Y	A	H	N	D	D	M	V
Query Conservation
Alig confidence										.	.	.	.	.																																							.	.	.	.	.
Template Conservation										.	.	.	.	.																																							.	.	.	.	.
Template Sequence		G	W	N	Y	V	S	T	L	.	.	.	.	.	A	S	E	G	S	Y	G	E	K	G	V	E	S	F	T	Q	I	S	K	E	A	G	G	L	C	I	A	Q	S	V	R	I	P	T	I	D	F	D	.	.	.	.	.	R	I	I	K	Q	L	L	D	T	P	N	S	R	A	V	V	I	F	A	N	D	E	D	I
Template Known Secondary structure		T								.	.	.	.	.			S	S																	T	T																	.	.	.	.	.							T	T	S	T	T
Template Predicted Secondary structure										.	.	.	.	.																																							.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	I	Q	A	I	K	E	A	G	L	K	P	G	K	D	I	L	T	G	S	I	D	G
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		K	Q	I	L	A	A	A	K	R	A	D	Q	V	.	.	G	H	F	L	W	V	G	S	D	S
Template Known Secondary structure											T	T		T	.	.	T	T	S						T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions