Job Description P39325 Confidence 28.94% Date Thu Jan 5 11:59:21 GMT 2012 Rank 226 Aligned Residues 212 % Identity 11% Template c2e4wA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:metabotropic glutamate receptor 3; PDBTitle: crystal structure of the extracellular region of the group ii2 metabotropic glutamate receptor complexed with 1s,3s-acpd Resolution 2.40 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.																	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		M	A	L	A	A	P	L	T	V	G	F	S	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	E	S	G	W	R	A	A	E	T	N	V	A	K	S	E	A	E	K	R	G	I	.	.	.	.	.	.	T	L	K	I	A	D	G	Q	Q	K	Q	E	N	Q	I	K	A	V	R	S	F
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	I	E	G	D	L	V	L	G	G	L	F	P	I	N	E	K	G	T	G	T	E	E	C	G	R	I	N	E	D	R	G	I	Q	R	L	E	A	M	L	F	A	I	D	E	I	N	K	D	N	Y	L	L	P	G	V	K	L	G	V	H	I	L	D	T	C	S	R	D	T	Y	A	L	E	Q	S	L	E	F
Template Known Secondary structure							S															T	T		S						T	T	T	T																T		T	T	S	S	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		76	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.																															.	.	.
Query SS confidence						.	.	.	.	.																															.	.	.
Query Sequence		V	A	Q	G	.	.	.	.	.	V	D	A	I	F	I	A	P	V	V	A	T	G	W	E	P	V	L	K	E	A	K	D	A	E	I	P	V	F	L	.	.	.	L	D	R	S	I	D	V	K	D	K	S	L	Y	M	T	T	V	T	A	D	N	I	L	E	G	K	L	I	G	D	W	L	V	K	E	V	N	G
Query Conservation						.	.	.	.	.																															.	.	.
Alig confidence						.	.	.	.	.					.																										.	.	.
Template Conservation															.
Template Sequence		V	R	A	S	L	I	P	L	L	I	A	G	V	.	I	G	G	S	Y	S	S	V	S	I	Q	V	A	N	L	L	R	L	F	Q	I	P	Q	I	S	Y	A	S	T	S	A	K	L	S	D	K	S	R	Y	D	Y	F	A	R	T	V	P	P	D	F	Y	Q	A	K	A	M	A	E	I	L	R	F	F	N	W	T
Template Known Secondary structure				T	T										.				S	S												G	G	G	T						S	S				G	G	G	G		T	T	T		T	T				S	S																	T	T
Template Predicted Secondary structure															.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	C	N	V	V	E	L	Q	G	T	V	G	A	S	V	A	I	D	R	K	K	G	F	A	E	A	I	K	N	A	P	N	I	K	I	I	R	S	Q	S	G	D	F	T	R	S	K	G	K	E	V	M	E	S	F	I	K	A	E	N	N	G	K	N	I	C	M	V	Y	A	H	N	D	D	M	V	I	G	A
Query Conservation
Alig confidence								.	.	.	.	.																																									.	.
Template Conservation								.	.	.	.	.																																									.	.
Template Sequence		Y	V	S	T	V	A	.	.	.	.	.	S	E	G	D	Y	G	E	T	G	I	E	A	F	E	Q	E	A	R	L	R	N	I	C	I	A	T	A	E	K	V	G	R	S	N	I	R	K	S	Y	D	.	.	S	V	I	R	E	L	L	Q	K	P	N	A	R	V	V	V	L	F	M	R	S	D	D	S	R	E	L
Template Known Secondary structure								.	.	.	.	.		S	S	T	T														T	T	T											T	T								.	.								T		T	T
Template Predicted Secondary structure								.	.	.	.	.																																									.	.
Template SS confidence
		212	.	.	.	.	.						.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		228	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	A	I	K	E	A	G	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	A	A	N	R	V	N	A	S
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions