Return to main results Retrieve Phyre Job Id

Job DescriptionP29680
Confidence27.77%DateThu Jan 5 11:45:39 GMT 2012
Rank260Aligned Residues100
% Identity10%Templated2q02a1
SCOP infoTIM beta/alpha-barrel Xylose isomerase-like IolI-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   253......260......... 270.........280.........290........ .300.........310....... ..320.
Predicted Secondary structure 



.........













.



.


Query SS confidence 
















. . . . . . . . .




























.


















.



Query Sequence  GQWLEAMAETGCDALGL. . . . . . . . . DWTTDIADARRRVGNKVALQGNMDPSMLY. APPARIEEEVATILAGFGH. GEGH
Query Conservation     
      
   
  .........
   

 
     
    
 




 

 .

 


   
   
     .  

Alig confidence 
















.........




























.


















.



Template Conservation     
  
   
 




                 
   
   

 
                       
  
  

   
Template Sequence  EAFFRLVKRLEFNKVELRNDXPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARA
Template Known Secondary structure  TT

TTSTTSSTTTT

TT
TTTTS

T
S
Template Predicted Secondary structure 

































Template SS confidence 















































































   21........30.........40.........50.........60.........70.........80.........90.........100
 
   322.......330.........340.........350..
Predicted Secondary structure 









Query SS confidence 






























Query Sequence  VFNLGHGIHQDVPPEHAGVFVEAVHRLSEQY
Query Conservation 

  

 
   

 


 
 
 

  
    
Alig confidence 






























Template Conservation 
 
                 
  
   
   
Template Sequence  LVLCPLNDGTIVPPEVTVEAIKRLSDLFARY
Template Known Secondary structure 



SS



TT
Template Predicted Secondary structure 





Template SS confidence 






























   101........110.........120.........130.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions