Job Description P29680 Confidence 80.99% Date Thu Jan 5 11:45:39 GMT 2012 Rank 96 Aligned Residues 126 % Identity 17% Template d1vjia_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.00

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.										.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.							.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.							.	.	.	.	.	.	.	.	.
Query Sequence		L	D	K	L	A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	.	.	.	.	V	L	T	G	R	D	.	.	.	.	.	.	.	.	.	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F
Query Conservation																																	.	.	.	.							.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	G	I	V	N	D	F	R	L	A	A	R	N	A	M	E	A	G	F	D	G	V	E	I	H	G	A	N	G	Y	L	I	D	Q	F	M	K	D	T	V	N	D	R	T	D	E	Y	G	G	S	L	Q	N	R	C	K	F	P	L	E	I	V	D	A	V	A	K	E	I	G	P	D	R	V	G	I	R	L	S
Template Known Secondary structure		S																		T		S								T	T	S								T	T	T					S	T	T	S	S	S																					G	G	G
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		249								250	.	.	.	.	.							.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.							.	.	.	.	.	.															.	.
Query SS confidence			.	.	.	.	.	.	.							.	.	.	.	.	.															.	.
Query Sequence		T	.	.	.	.	.	.	.	K	G	G	G	Q	W	.	.	.	.	.	.	L	E	A	M	A	E	T	G	C	D	A	L	G	L	.	.	D	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A
Query Conservation			.	.	.	.	.	.	.							.	.	.	.	.	.															.	.
Alig confidence			.	.	.	.	.	.	.							.	.	.	.	.	.															.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	F	A	D	Y	M	E	S	G	D	T	N	P	G	A	L	G	L	Y	M	A	E	S	L	N	K	Y	G	I	L	Y	C	H	V	I	E	A	R	M	H	T	L	M	P	M	R	K	A	F	K	G	T	F	I	S	A	G	G	F	T	R	.	.	.	.	.	.	.	.	.	.	.	E	D	G	N	E	A	V	S
Template Known Secondary structure		T	T			T	T	T				S	S												T	T	T	T	T		S																					S						S	S				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.												.	300	.	.	.	.	.	.
		314	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	G	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	R	T	D
Template Known Secondary structure		T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions