Job Description P29680 Confidence 67.23% Date Thu Jan 5 11:45:39 GMT 2012 Rank 127 Aligned Residues 181 % Identity 13% Template d1umya_ SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 2.5

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	N	A	V	R	T	I	R	R	E	L	K	G	E	V	P	L	I	G	F	S	G	S	P	W	T	L	A	T	Y	M	V	E	G	G	S	S	K	A	F	T	V	I	K	K	M	M	Y	A	D	P	Q	A	L	H	A	L	L	D	K	L	A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A
Query Conservation
Alig confidence																													.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	A	A	C	D	I	A	R	Q	V	A	D	E	G	D	A	L	V	A	G	G	V	S	Q	T	P	.	.	S	Y	L	S	C	K	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	V	K	K	I	F	H	Q	Q	L	E	V	F	M	K	K	N	V	D	F
Template Known Secondary structure															T	T	T												.	.				T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T		S
Template Predicted Secondary structure																													.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.																							.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.									.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.					.
Query SS confidence																																															.	.	.	.	.	.	.	.					.
Query Sequence		V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	.	.	.	.	.	.	.	.	T	K	G	G	.	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	D	W	T	T	D
Query Conservation																																															.	.	.	.	.	.	.	.					.
Alig confidence				.	.	.	.													.	.	.	.	.	.	.	.													.	.	.					.	.	.	.	.	.	.	.					.
Template Conservation				.	.	.	.													.	.	.	.	.	.	.	.													.	.	.
Template Sequence		L	I	.	.	.	.	A	E	Y	F	E	H	V	E	E	A	V	W	.	.	.	.	.	.	.	.	A	V	E	A	L	K	T	S	G	K	P	I	.	.	.	A	A	T	M	C	I	G	P	E	G	D	L	H	G	V	S	P	G	E	C	A	V	R	L	V	K	A	G	A	A	I	V	G	V	N	C	H	F	D
Template Known Secondary structure				.	.	.	.					S								.	.	.	.	.	.	.	.							T	T		S			.	.	.								T	T			T	T														T	T		S						S	S	S
Template Predicted Secondary structure				.	.	.	.													.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		156	.					.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		275	.	.	.	.	280	.	.	.	.	.													.	.	.	.	290	.	.	.		.	.	.	.	.	.																			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.									.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.									.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	D	A	R	R	R	V	G	N	K	.	.	.	.	.	.	.	.	.	.	.	.	V	A	L	Q	G	N	M	D	.	P	S	M	L	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.									.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.									.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		P	S	T	S	L	Q	T	I	K	L	M	K	E	G	L	E	A	A	R	L	K	A	Y	L	M	S	Q	P	L	A	Y	H	T	P	D	C	G	K	Q	G	F	I	D	L	P	E	F	P	F	G	L	E	P	R	V	A	T	R	W	D	I	Q	K	Y	A	R	E	A	Y	N	L	G	V	R	.	.	.	.	Y	I
Template Known Secondary structure																		T	T	T											S	B			T	T			S	S	T	G	G	G	S	T	T	T	T	T	S		G	G	G	B																	T			.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	G	H	G	I	H	Q	D	V	P	P	E	H	A	G	V	F	V	E	A	V	H	R	L	S	E	Q
Query Conservation
Alig confidence			.				.	.	.
Template Conservation			.				.	.	.
Template Sequence		G	.	G	C	C	.	.	.	G	F	E	P	Y	H	I	R	A	I	A	E	E	L	A	P	E	R	G	F
Template Known Secondary structure			.			T	.	.	.	T													T					T
Template Predicted Secondary structure			.				.	.	.
Template SS confidence
		297		.	.	300				.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions