Job Description P29680 Confidence 94.82% Date Thu Jan 5 11:45:39 GMT 2012 Rank 23 Aligned Residues 154 % Identity 15% Template d1qopa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.4

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.										.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																													.																	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence																													.																	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	.	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	.	.	.	.	.	.	.	.	.	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	.	.	.	.	.
Query Conservation																													.																	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Alig confidence																													.																	.	.	.	.	.	.	.	.	.												.	.										.	.	.	.	.
Template Conservation																																																																		.	.
Template Sequence		I	E	Q	S	L	K	I	I	D	T	L	I	D	A	G	A	D	A	L	E	L	G	V	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	N	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	I	I	R	E	K	H	P	.	.	T	I	P	I	G	L	L	M	Y	A	N	L	V	F
Template Known Secondary structure															T	T		S	S								S			T	T															T	T																		S	.	.	S	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.
				251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.
Predicted Secondary structure		.	.																																																	.	.																									.
Query SS confidence		.	.																																																	.	.																									.
Query Sequence		.	.	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	D	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	.	.	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	.	F	N	L
Query Conservation		.	.																																																	.	.																									.
Alig confidence		.	.																				.													.	.															.	.														.	.	.	.	.	.						.
Template Conservation																							.													.	.																														.	.	.	.	.	.
Template Sequence		N	N	G	I	D	A	F	Y	A	R	C	E	Q	V	G	V	D	S	V	L	V	.	A	D	V	P	V	E	E	S	A	P	F	R	.	.	Q	A	A	L	R	H	N	I	A	P	I	F	I	C	P	P	N	A	D	D	D	L	L	R	Q	V	A	S	Y	.	.	.	.	.	.	G	R	G	Y	T	Y	L	L	S
Template Known Secondary structure		T	T													T							.	T	T			G	G	G						.	.						T	T									T	T													.	.	.	.	.	.			S						S
Template Predicted Secondary structure																							.													.	.																														.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.							170	.	.	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	G	I	H	Q	D	V	P	P	E	H	A	G	V	F	V	E	A	V	H	R	L	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	G	V	T	G	A	E	N	R	G	P	L	H	H	L	I	E	K	L	K	E	Y	H	A
Template Known Secondary structure		S	S	S				S	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions