Job Description P29680 Confidence 35.16% Date Thu Jan 5 11:45:39 GMT 2012 Rank 232 Aligned Residues 203 % Identity 17% Template d1lt7a_ SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 2.15

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	E	L	A	C	E	V	T	L	Q	P	L	R	R	Y	P	L	D	A	A	I	L	F	S	D	I	L	T	V	P	D	A	M	G	L	G	L	Y	F	E	A	G	E	G	P	R	F	T	S	P	V	T	C	K	A	D	V	D	K	L	P	I	P	D	P	E	D	E	L	G	Y	V	M	N	A	V	R	T	I
Query Conservation
Alig confidence																.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	P	E	A	V	R	Q	L	H	R	E	F	L	R	.	A	G	S	N	V	M	Q	T	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	E	A	A	A	D	I	A
Template Known Secondary structure																.		T		S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.																																															.	.	.	.	80	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	E	L	K	G	E	V	P	L	I	G	F	S	G	S	P	W	T	L	A	T	Y	M	V	E	G	G	S	S	K	A	F	T	V	I	K	K	M	M	Y	A	D	P	Q	A	L	H	A	L	L	D	K	L	A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G
Query Conservation
Alig confidence																					.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																					.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Sequence		R	Q	V	A	D	E	G	D	A	L	V	A	G	G	V	S	Q	T	P	.	.	S	Y	L	S	A	K	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	V	K	K	V	F	L	Q	Q	L	E	V	F	M	K	K	N	V	D	F	L	I	.	.	.	.	A	E
Template Known Secondary structure							T	T	T												.	.				T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T		S				.	.	.	.
Template Predicted Secondary structure																					.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.																							.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.									250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.																																		.
Query SS confidence																																								.	.	.	.	.	.	.	.																																		.
Query Sequence		G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	.	.	.	.	.	.	.	.	K	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	D	W	T	T	D	I	A	D	A	R	R	R	V	.
Query Conservation																																								.	.	.	.	.	.	.	.																																		.
Alig confidence								.	.	.	.	.	.	.	.																		.	.						.	.	.	.	.	.	.	.																																		.
Template Conservation								.	.	.	.	.	.	.	.																		.	.
Template Sequence		Y	F	E	H	V	E	.	.	.	.	.	.	.	.	E	A	V	W	A	V	E	T	L	I	A	S	G	K	P	V	A	.	.	A	T	M	A	I	G	P	E	G	D	L	H	G	V	P	P	G	E	A	A	V	R	L	V	K	A	G	A	S	I	I	G	V	N	C	H	F	D	P	T	I	S	L	K	T	V	K
Template Known Secondary structure				S				.	.	.	.	.	.	.	.										G	G	G	S	S				.	.						B	T	T	B	S	T	T	S													T	T		S						S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		160	.	.	.	.	.									.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
													283	.	.	.	.	.	.	290	.	.	.														.	.	.	.	.							.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	G	N	K	V	A	L	Q	G	N	M	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	M	L	Y	.	.	.	.	.	.	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																				.	.	.	.				.				.	.	.
Template Conservation																																																																			.	.	.	.				.				.	.	.
Template Sequence		L	M	K	E	G	L	E	A	A	Q	L	K	A	H	L	M	S	Q	P	L	A	Y	H	T	P	D	A	N	K	Q	G	F	I	D	L	P	E	F	P	F	G	L	E	P	R	V	A	T	R	W	D	I	Q	K	Y	A	R	E	A	Y	N	L	G	V	R	.	.	.	.	Y	I	G	.	G	C	C	.	.	.	G
Template Known Secondary structure										T	T											S	B			T	T			T	T		G	G	G	S	T	T	T	T	T	S		G	G	G	B																	T			.	.	.	.				.			T	.	.	.	T
Template Predicted Secondary structure																																																																			.	.	.	.				.				.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.		.	.	300				.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	P	E	H	A	G	V	F	V	E	A	V	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	P	Y	H	I	R	A	I	A	E	E	L	A	P
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions