Job Description P29680 Confidence 100.00% Date Thu Jan 5 11:45:39 GMT 2012 Rank 5 Aligned Residues 338 % Identity 41% Template d1j93a_ SCOP info TIM beta/alpha-barrel UROD/MetE-like Uroporphyrinogen decarboxylase, UROD Resolution 2.30

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	R	A	L	L	R	Q	P	V	D	V	T	P	V	W	M	M	R	Q	A	G	R	Y	L	P	E	Y	K	A	T	R	A	Q	A	G	D	F	M	S	L	C	K	N	A	E	L	A	C	E	V	T	L	Q	P	L	R	R	Y	P	L	D	A	A	I	L	F	S	D	I	L	T	V	P	D	A	M	G	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	D	A	V	R	G	K	E	V	E	R	P	P	V	W	L	M	R	Q	A	G	R	Y	M	K	S	Y	Q	L	L	C	E	K	Y	P	L	F	R	D	R	S	E	N	V	D	L	V	V	E	I	S	L	Q	P	W	K	V	F	R	P	D	G	V	I	L	F	S	D	I	L	T	P	L	S	G	M	N	I	P
Template Known Secondary structure								T				S	S			B			S				T	T	T	T	T								S	S		S	T	T	T	T	T	T																			S								T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	F	E	A	G	E	G	P	R	F	T	S	P	V	T	C	K	A	D	V	D	K	L	P	I	P	D	P	E	D	E	L	G	Y	V	M	N	A	V	R	T	I	R	R	E	L	K	G	E	V	P	L	I	G	F	S	G	S	P	W	T	L	A	T	Y	M	V	E	G	G	S	S	K	A	F	T	V	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	I	I	K	G	K	G	P	V	I	F	D	P	L	R	T	A	A	D	V	E	K	V	R	E	F	I	P	E	K	S	V	P	Y	V	G	E	A	L	T	I	L	R	K	E	V	N	N	Q	A	A	V	L	G	F	V	G	A	P	F	T	L	A	S	Y	V	V	E	G	G	S	S	K	N	F	T	K	I	K
Template Known Secondary structure						T	T	T					S	S				S																															T	T	S	S																			S	B			S	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	M	Y	A	D	P	Q	A	L	H	A	L	L	D	K	L	A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F
Query Conservation
Alig confidence																																																																									.	.
Template Conservation																																																																									.	.
Template Sequence		R	L	A	F	A	E	P	K	V	L	H	A	L	L	Q	K	F	A	T	S	M	A	K	Y	I	R	Y	Q	A	D	S	G	A	Q	A	V	Q	I	F	D	S	W	A	T	E	L	S	P	V	D	F	E	E	F	S	L	P	Y	L	K	Q	I	V	D	S	V	K	L	T	H	P	.	.	N	L	P	L	I	L	Y
Template Known Secondary structure																																T	T		S							G	G	G	G	G	S									T															S	T	.	.	T
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	D	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G
Query Conservation
Alig confidence																																																																						.
Template Conservation																																																																						.
Template Sequence		A	S	G	S	G	G	L	L	E	R	L	P	L	T	G	V	D	V	V	S	L	D	W	T	V	D	M	A	D	G	R	R	R	L	G	P	N	V	A	I	Q	G	N	V	D	P	G	V	L	F	G	S	K	E	F	I	T	N	R	I	N	D	T	V	K	K	A	G	.	K	G	K	H	I	L	N	L	G	H	G
Template Known Secondary structure			S	S		T	T	T	G	G	G	G	G	G	G			S						T	T	S									T		S	S	S						B		G	G	G	G	G	S																		.	S	S	S			B		B	S	S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	Q	D	V	P	P	E	H	A	G	V	F	V	E	A	V	H	R	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	V	G	T	P	E	E	N	F	A	H	F	F	E	I	A	K	G	L	R
Template Known Secondary structure				T	T															T
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions