 |
Job Description | P29680 | Confidence | 65.32% | Date | Thu Jan 5 11:45:39 GMT 2012 |
Rank | 134 | Aligned Residues | 123 |
% Identity | 9% | Template | d1eepa_ |
SCOP info | TIM beta/alpha-barrel
| Inosine monophosphate dehydrogenase (IMPDH)
| Inosine monophosphate dehydrogenase (IMPDH)
|
Resolution | 2.40 |
|
 |
  |   |
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
. | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | Y | L | N | A | Q | I | K | A | G | A | Q | A | V | M | I | F | D | T | W | G | G | V | L | T | G | R | D | Y | Q | Q | F | S | L | Y | Y | M | H | K | I | V | D | G | L | L | R | E | N | D | G | R | R | V | P | V | T | L | F | T | K | . |
G | G | G | Q | W | L | E | A | M | A | E | T | G | C | D | A | L | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |
|
|
|   |   |
|   |
|
|   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
| . |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   | . |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
Template Sequence |   |
K | E | A | A | L | D | L | I | S | V | G | A | D | C | L | K | V | G | I | G | P | G | S | I | C | T | T | R | I | V | A | G | V | G | V | P | Q | I | T | A | I | C | D | . |
V | Y | E | A | C | N | N | T | N | I | C | I | I | A | D | G | G | I | R | F | S | G | D | V | V | K | A | I | A | A | G | A | D | S | V | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | T |
| S |  |  |  |  |
| S | S |
| S | T | T | S |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | |
. | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . |
  |
  |   |
269 | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | W | T | T | D | I | A | D | A | R | R | R | V | G | N | K | V | A | L | Q | G | N | M | D | P | S | M | L | Y | A | P | P | A | R | I | E | E | E | V | A | T | I | L | A | G | F | G |
Query Conservation |   |
  |
|   |   |   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|
|   |
|
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
| . | . | . |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |
Template Sequence |   |
I | G | . |
. |
. |
N | L | F | A | G | T | K | E | S | P | S | E | E | I | I | Y | N | G | K | K | F | K | S | M | V | P | Y | S | G | K | L | K | D | I | L | T | Q | L | K | G | G | L | M |
Template Known Secondary structure |   |
 |
| . | . | . |  |  |  |  | T | B | T | T | S | S | S |
|  |  |  |  | T | T |  |  |  |  |
|
|  |  |
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
| . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
284 | . | |
|
|
. | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|