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Job DescriptionP29680
Confidence45.93%DateThu Jan 5 11:45:39 GMT 2012
Rank190Aligned Residues175
% Identity15%Templated1bxna1
SCOP infoTIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110.........120.........130.........140...... ...150.........160.........170.........180.
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Query Sequence  VTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSG. SPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL
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Template Sequence  MKDDENINSQPFMHWRDRFLFVMDAVNKASAATGEVKGSYLNVTAGTME. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   203......210.........220.........230.........240.........250.
 
   182.......190.........200.........210.........220.........230.........240.........250.........260.
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Query Sequence  LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAE
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Template Sequence  . . . . . . EMYRRAEFAKSLGSVIIMVDL. IVGW. . . . . . . . . . . . . . . TCIQSMSNWCRQNDMILHLHRAGHGTYTR. . . .
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   252.......260.........270.. .... ...280.........290.........300.....
 
   262.......270.... .....280.........290.........300.........310.. .......320...
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Query Sequence  TGCDALGLDWTTD. . . IADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATIL. . . . . . . . . . . . . . . AGFGHGEGHVF
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Template Sequence  . . . . . . QKNHGVSFRVIAKWLRLAGVDHMHTGTAVGKL. EGDPLTVQGYYNVCRDAYTQTDLTRGLFFDQDWASLRKVMP
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   306...310.........320.........330....... ..340.........350.........360.........370........
 
   324.....330.........340.
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Query Sequence  NLGHGIHQDVPPEHAGVF
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Template Sequence  VASGGIHAGQMHQLIHLF
Template Known Secondary structure  S

GGG
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   379380.........390......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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