Job Description P29680 Confidence 52.71% Date Thu Jan 5 11:45:39 GMT 2012 Rank 166 Aligned Residues 153 % Identity 13% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250								.
Predicted Secondary structure																													.															.	.	.	.	.	.																									.	.	.	.	.	.	.
Query SS confidence																													.															.	.	.	.	.	.																									.	.	.	.	.	.	.
Query Sequence		A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	.	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	.	.	.	.	.	.	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	.	.	.	.	.	.	.	G
Query Conservation																													.															.	.	.	.	.	.																									.	.	.	.	.	.	.
Alig confidence																													.															.	.	.	.	.	.														.	.										.	.	.	.	.	.	.
Template Conservation																																																															.	.
Template Sequence		L	Q	T	S	E	A	F	L	Q	R	L	D	Q	S	P	I	D	I	L	E	L	G	V	A	Y	S	D	P	I	A	D	G	E	I	I	A	D	A	A	K	I	A	L	D	Q	G	V	D	I	H	S	V	F	E	L	L	A	R	I	K	T	.	.	K	K	A	L	V	F	X	V	Y	Y	N	L	I	F	S	Y	G
Template Known Secondary structure											T	G	G	G	S	S		S								S	S					S	S													T	T												T				.	.	S	S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.																											270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	K	F	V	K	K	A	K	S	L	G	I	C	A	L	I	V	P	E	L	S	F	E	E	S	D	D	L	I	K	E	C	E	R	Y	N	I	A	L	I	T	L	V	S	V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K	G	F	I	Y	L	L	A	S	I	G	I	T	G	T	K	S	V	E	E
Template Known Secondary structure												T	T							T	T			G	G	G												T									T	T	S										T	T			S								S		S	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D	V	P	P	E	H	A	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	L	Q	D	K	V	K	E	I	R	S	F	T	N	L	P	I	F	V	G	F	G	I	Q	N	N	Q	D	V	K	R	X	R	K
Template Known Secondary structure													T	T			S						S	S			S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions