Job Description P29680 Confidence 32.52% Date Thu Jan 5 11:45:39 GMT 2012 Rank 247 Aligned Residues 83 % Identity 11% Template c3tdmD_ PDB info PDB header:de novo protein Chain: D: PDB Molecule:computationally designed two-fold symmetric tim-barrel PDBTitle: computationally designed tim-barrel protein, halfflr Resolution 2.40 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	.	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L
Query Conservation																																																																.
Alig confidence																													.	.	.	.	.	.	.	.																.	.	.										.
Template Conservation																													.	.	.	.	.	.	.	.																.	.	.
Template Sequence		L	R	D	W	V	V	E	V	E	K	R	G	A	G	E	I	L	L	T	S	I	D	R	D	G	T	K	.	.	.	.	.	.	.	.	S	G	Y	D	T	E	M	I	R	F	V	R	P	L	T	.	.	.	T	L	P	I	I	A	S	G	G	A	G	K	M	E	H	F	L	E	A	F	L	R	G	A	D	K	V
Template Known Secondary structure												T	T		S							S	S	S		S	S	S	.	.	.	.	.	.	.	.	S											G	G	G		.	.	.		S						S				S										T	T		S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.																.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		268	.	270						.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		G	L	D	.	.	.	.	.	W	T	T	D	I	A	D	A	R	R	R	V
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.
Template Conservation
Template Sequence		S	I	N	T	A	A	V	E	N	P	S	L	I	T	Q	I	A	Q	T	F
Template Known Secondary structure				S							T								T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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