Job Description P29680 Confidence 80.79% Date Thu Jan 5 11:45:39 GMT 2012 Rank 97 Aligned Residues 134 % Identity 13% Template c3t4cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria Resolution 1.95 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.																		.
Template Conservation																			.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.																		.
Template Sequence		Q	M	T	I	D	T	A	G	R	L	K	E	I	C	A	K	L	.	.	.	.	.	.	.	.	.	.	N	V	P	F	I	Y	K	S	S	M	D	E	G	L	R	I	L	G	E	V	K	R	Q	L	G	L	P	.	.	.	.	.	V	L	T	D	V	H	S	I	D	E	I	E	Q	V	A	S	V	.	V	D	V
Template Known Secondary structure																		T	.	.	.	.	.	.	.	.	.	.	T																								T			.	.	.	.	.							S									T	T	.		S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.																		.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.											.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90
		267	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.				.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.			.
Predicted Secondary structure						.	.	.	.																																			.	.	.																																	.	.
Query SS confidence						.	.	.	.																																			.	.	.																																	.	.
Query Sequence		L	G	L	D	.	.	.	.	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	.	.	.	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D	V	P	P	E	.	.	H
Query Conservation						.	.	.	.																																			.	.	.																																	.	.
Alig confidence						.	.	.	.																								.	.	.	.	.							.	.	.																																	.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		L	Q	T	P	A	F	L	C	R	Q	T	D	F	I	H	A	C	A	R	S	G	K	P	V	N	I	K	K	G	Q	F	.	.	.	.	.	L	A	P	H	D	M	K	N	V	I	D	K	A	R	E	A	A	R	E	A	G	L	S	E	D	R	F	M	A	C	E	R	G	V	S	F	G	Y	N	N	L	V	S	D
Template Known Secondary structure						G	G	G	T	T										T	T	S	S								T	T	.	.	.	.	.	S		G	G	G															T	T			S													S	S	S
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		338	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	R	S	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions