Job Description P29680 Confidence 89.98% Date Thu Jan 5 11:45:39 GMT 2012 Rank 60 Aligned Residues 156 % Identity 16% Template c3sz8D_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei Resolution 2.05 Å

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		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		D	K	L	A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	.	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	G	G	G	Q	W	L	E	A	M	A	E
Query Conservation																																.
Alig confidence																																.																														.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		D	F	T	L	D	V	C	G	E	Y	V	A	V	T	R	K	L	G	I	P	F	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	V	G	L	D	E	G	L	K	I	F	A	E	V	K	A	R	F	G	V	P	.	.	.	.	V	I	T	D	V	H	E	A	E	Q	A	A	P	V	A	E
Template Known Secondary structure																			T									S			T	T		S	S	T	T	S				S																				.	.	.	.							S	G	G	G
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		262	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		T	G	C	D	A	L	G	L	D	.	.	.	.	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D	V	P	P	E	H
Query Conservation											.	.	.	.
Alig confidence			.								.	.	.	.																								.	.	.	.	.																		.
Template Conservation			.																																			.	.	.	.	.																		.
Template Sequence		I	.	A	D	V	L	Q	V	P	A	F	L	A	R	Q	T	D	L	V	V	A	I	A	K	A	G	K	P	V	N	V	K	K	P	Q	F	.	.	.	.	.	M	S	P	T	Q	L	K	H	V	V	S	K	C	G	E	V	G	.	N	D	R	V	M	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	D
Template Known Secondary structure			.		S						G	G	G	T	T											T		S								T	T	.	.	.	.	.	S		T	T	S											T	T	.														S	S	S
Template Predicted Secondary structure			.																																			.	.	.	.	.																		.
Template SS confidence
		106		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	V	F	V	E	A	V	H	R	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	G	F	R	Q	M	A	E	T	T	G
Template Known Secondary structure		T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions