Job Description P29680 Confidence 68.44% Date Thu Jan 5 11:45:39 GMT 2012 Rank 126 Aligned Residues 131 % Identity 12% Template c3qc3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	D
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																		.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																		.
Template Sequence		Q	W	V	K	P	X	A	V	A	G	A	N	Q	Y	T	F	H	L	E	A	T	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	A	L	I	K	D	I	R	E	N	G	X	K	V	G	.	.	L	A	I	K	P	G	T	S	V	E	Y	L	A	P	W	A	N	.	Q	I	D	X	A	L	V	X
Template Known Secondary structure											T		S						G	G	G		S		.	.	.	.	.	.	.	.	.	.	.	.	.											T	T					.	.					T	T	S		G	G	G	G	T	T	T	G	G	.	G	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																		.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100														.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.
		271	.	.	.															.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		W	T	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	D	A	R	R	R	V	G	N	.	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D	V	P	P
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.											.											.	.	.	.	.	.	.	.	.	.	.													.	.														.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.													.	.														.
Template Sequence		T	V	E	P	G	F	G	G	Q	K	F	X	E	D	X	X	P	K	V	H	W	L	R	T	Q	F	P	S	L	D	I	E	V	D	G	G	V	G	P	.	.	.	.	.	.	.	.	.	.	.	D	T	V	H	K	C	A	E	A	G	A	N	.	.	X	I	V	S	G	S	A	I	X	R	S	E	D	.	P	R
Template Known Secondary structure		S	S		T	T		S	S					G	G	G												T	T							S	S		S	T	.	.	.	.	.	.	.	.	.	.	.	T	T								T			.	.										T		S		.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.													.	.														.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180												.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.		.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	A	G	V	F	V	E	A	V	H	R	L	S	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	I	N	L	L	R	N	V	C	S	E	A	A	Q	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions