Job Description P29680 Confidence 23.19% Date Thu Jan 5 11:45:39 GMT 2012 Rank 291 Aligned Residues 157 % Identity 14% Template c3mo4B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-1,3/4-fucosidase; PDBTitle: the crystal structure of an alpha-(1-3,4)-fucosidase from2 bifidobacterium longum subsp. infantis atcc 15697 Resolution 1.90 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																										.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	.	.	.	.	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.																								.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.
Template Sequence		D	L	V	R	E	V	S	E	S	A	R	R	H	G	L	K	F	G	V	Y	L	S	P	W	D	R	T	E	E	S	Y	G	K	G	K	A	Y	D	D	F	Y	V	G	Q	L	T	E	L	L	T	Q	.	.	.	.	.	.	Y	G	P	I	F	S	V	W	L	D	G	A	N	G	E	G	K	N	G	K	T	Q	Y
Template Known Secondary structure														T	T									S			S	S		T	T	T	T	S	S																	S	.	.	.	.	.	.	S	S			S										B		T	T	S		B
Template Predicted Secondary structure																																																					.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
			251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	D	W	T	T	D	I	A	D	A	R	R	R	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	W	D	R	Y	Y	N	V	I	R	S	L	Q	P	D	A	V	I	S	V	C	G	P	D	V	R	W	A	G	N	E	A	G	H	V	R	D	N	E	W	S	V	V	P	R	R	L	R	S	A	E	L	T	X	E	T	V	S	S	Q	D	D	D	L	G	S	R	E	A	V	A	G	Y	G	D	N	V	C	W
Template Known Secondary structure																T	T						S	S	S	S	B							T	T				S	S			S				G	G	G	G	G	T	T								T	T		S		S	S	S					G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
						284	.	.	.	.	.	290	.	.					.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure		.	.	.	.										.	.	.	.
Query SS confidence		.	.	.	.										.	.	.	.
Query Sequence		.	.	.	.	N	K	V	A	L	Q	G	N	M	.	.	.	.	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D	V	P	P	E	H	A	G	V	F	V	E	A	V	H	R	L	S	E	Q	Y
Query Conservation		.	.	.	.										.	.	.	.
Alig confidence		.	.	.	.										.	.	.	.																.	.	.
Template Conservation																																		.	.	.
Template Sequence		Y	P	A	E	V	D	T	S	I	R	P	G	W	F	Y	H	Q	S	E	D	D	K	V	X	S	A	D	Q	L	F	D	L	.	.	.	W	L	S	A	V	G	G	N	S	S	L	L	L	N	I	P	P	S	P	E	G	L	L	A	E	P	D	V	Q	S	L	K	G	L	G	R	R	V	S	E	F	R
Template Known Secondary structure										S	S	S	S	S	S			G	G	G	G	G	G											.	.	.						T	B	T											T	T	S	S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.				310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions