Job Description P29680 Confidence 55.30% Date Thu Jan 5 11:45:39 GMT 2012 Rank 157 Aligned Residues 136 % Identity 10% Template c3g8rA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472 Resolution 2.49 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.												.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.												.						.	.	.	.	.	.	.	.	.	.	.				.	.
Query SS confidence																	.	.	.	.	.												.						.	.	.	.	.	.	.	.	.	.	.				.	.
Query Sequence		K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	.	.	.	.	.	Q	A	V	M	I	F	D	T	W	G	G	.	V	L	T	G	R	.	.	.	.	.	.	.	.	.	.	.	D	Y	Q	.	.	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L
Query Conservation																	.	.	.	.	.												.						.	.	.	.	.	.	.	.	.	.	.				.	.
Alig confidence																	.	.	.	.	.												.						.	.	.	.	.	.	.	.	.	.	.				.	.																			.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		E	H	G	V	A	L	I	R	A	I	R	E	S	C	Q	G	F	D	F	D	F	G	F	K	L	Q	Y	R	N	L	D	T	F	I	H	S	S	F	K	G	R	D	D	V	K	Y	V	K	R	F	E	E	T	R	L	Q	P	E	Q	X	Q	K	L	V	A	E	X	K	A	N	G	.	.	.	.	.	.	F	K	A
Template Known Secondary structure															T	T	T			S															S		G	G	G	T	T			S	S	S	S							T																	T	T	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.							.	.	.
		248	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure								.																		.	.	.	.
Query SS confidence								.																		.	.	.	.
Query Sequence		F	T	K	G	G	G	.	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	D	.	.	.	.	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V
Query Conservation								.																		.	.	.	.
Alig confidence								.																		.	.	.	.																							.	.	.	.	.	.																				.	.	.	.
Template Conservation																																																				.	.	.	.	.	.																				.	.	.	.
Template Sequence		I	C	T	P	F	D	E	E	S	V	D	L	I	E	A	H	G	I	E	I	I	K	I	A	S	C	S	F	T	D	W	P	L	L	E	R	I	A	R	S	D	K	P	V	V	A	S	T	A	G	.	.	.	.	.	.	A	R	R	E	D	I	D	K	V	V	S	F	X	L	H	R	G	K	D	.	.	.	.	L
Template Known Secondary structure							S										T	T								S	S	S	T	T										T	S		S							T	T	.	.	.	.	.	.															T	T	T			.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.							.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	L	G	H	G	I	H	Q	D	V	P	P	E	H	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	X	H	C	V	A	E	Y	P	T	P	D	D	H	L
Template Known Secondary structure										S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions