Job Description P29680 Confidence 42.86% Date Thu Jan 5 11:45:39 GMT 2012 Rank 204 Aligned Residues 134 % Identity 11% Template c3eegB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of a 2-isopropylmalate synthase from2 cytophaga hutchinsonii Resolution 2.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	G	G	G	Q	W	L	E	A	M	A	E	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.																			.	.																		.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		T	E	E	K	I	I	V	A	K	A	L	D	E	L	G	V	D	V	I	E	A	G	F	P	V	S	S	.	.	.	.	.	.	.	.	.	.	.	.	P	G	D	F	N	S	V	V	E	I	T	K	A	V	T	R	P	T	.	.	I	C	A	L	T	R	A	K	E	A	D	I	N	I	A	G	E	A	L	R	F
Template Known Secondary structure														T	T	T		S							T	T	T		.	.	.	.	.	.	.	.	.	.	.	.												T	T			S	S		.	.							S													T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.													.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	C	D	A	L	G	L	D	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D	V	P	P	E	H	A	G	V	F
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		A	K	R	S	R	I	H	T	G	I	G	S	S	D	I	H	I	E	H	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	T	R	E	N	I	L	E	X	A	V	A	A	V	K	Q	A	.	K	K	V	V	H	E	V	E	F	F	C	E	D	A	G	R	A	D	Q	A	F	L	A	R	X
Template Known Secondary structure			S	S										S							T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			T	T	T	T											.				S	S								S	T	T	T	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		342	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	V	H	R	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	A	V	I	E	A	G
Template Known Secondary structure							T	T	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions