Job Description P29680 Confidence 20.79% Date Thu Jan 5 11:45:39 GMT 2012 Rank 305 Aligned Residues 153 % Identity 15% Template c3chvA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution Resolution 1.45 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260
Predicted Secondary structure																							.	.						.																																										.	.	.
Query SS confidence																							.	.						.																																										.	.	.
Query Sequence		K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	.	.	D	T	W	G	G	.	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	G	G	G	.	.	.	Q	W	L	E	A	M	A
Query Conservation																							.	.						.																																										.	.	.
Alig confidence																							.	.						.										.	.	.	.	.	.	.	.											.	.													.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.											.	.
Template Sequence		S	E	Q	V	E	S	T	Q	E	A	F	E	A	G	A	A	I	A	H	C	H	V	R	N	D	D	G	T	P	S	S	D	P	D	R	F	A	R	.	.	.	.	.	.	.	.	L	T	E	G	L	H	T	H	C	P	.	.	G	X	I	V	Q	F	S	T	G	G	R	S	G	A	G	Q	A	R	G	G	X	L
Template Known Secondary structure															T											T	T	S												.	.	.	.	.	.	.	.									S	T	.	.	T									T	T	T			G	G	G	G	G	T	T	G
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.											.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70									.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.											.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.				320	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query Sequence		E	T	G	C	D	A	L	G	L	D	W	T	T	.	.	.	.	.	.	.	.	.	.	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	.	.	.	G	H	V	F	N	L	G	H
Query Conservation															.	.	.	.	.	.	.	.	.	.																																															.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.										.	.																																				.	.	.
Template Conservation																																		.	.
Template Sequence		P	L	K	P	D	X	A	S	L	S	V	G	S	N	N	F	P	S	R	V	Y	E	N	P	P	D	L	V	D	W	L	A	.	.	A	Q	X	R	S	Y	R	V	T	P	E	I	E	A	F	D	L	S	H	I	L	R	A	I	D	X	H	G	R	G	L	L	Y	G	K	L	Y	V	Q	F	V	X	G	V	K	N
Template Known Secondary structure		G	G			S							S					S	S	S														.	.							T								S	S													T	T		S		S	S										T	T
Template Predicted Secondary structure																																		.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	H	Q	D	V	P	P	E	H	A	G	V	F	V	E	A	V	H	R	L	S	E	Q	Y	H
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		A	X	P	A	D	.	.	R	E	V	F	D	F	Y	V	R	X	X	R	T	R	A	P	Q	A	E
Template Known Secondary structure		S					.	.																T	T	S
Template Predicted Secondary structure							.	.
Template SS confidence
		181	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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