Job Description P29680 Confidence 100.00% Date Thu Jan 5 11:45:39 GMT 2012 Rank 4 Aligned Residues 340 % Identity 40% Template c2infB_ PDB info PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 bacillus subtilis Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	D	R	Y	L	R	A	L	L	R	Q	P	V	D	V	T	P	V	W	M	M	R	Q	A	G	R	Y	L	P	E	Y	K	A	T	R	A	Q	A	G	D	F	M	S	L	C	K	N	A	E	L	A	C	E	V	T	L	Q	P	L	R	R	Y	P	L	D	A	A	I	L	F	S	D	I	L	T	V	P	D	A
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		F	N	E	T	F	L	K	A	A	R	G	E	K	A	D	H	T	P	V	W	Y	M	R	Q	A	G	R	S	Q	P	E	Y	R	K	L	K	E	.	K	Y	G	L	F	E	I	T	H	Q	P	E	L	C	A	Y	V	T	R	L	P	V	E	Q	Y	G	V	D	A	A	I	L	Y	K	D	I	M	T	P	L	P	S
Template Known Secondary structure											T	T				S	S			B			T	T		S	S	T	T	S									.								T	T																			S								T	T	T	T	S	G	G
Template Predicted Secondary structure																																							.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	L	G	L	Y	F	E	A	G	E	G	P	R	F	T	S	P	V	T	C	K	A	D	V	D	K	L	P	I	P	D	P	E	D	E	L	G	Y	V	M	N	A	V	R	T	I	R	R	E	L	K	G	E	V	P	L	I	G	F	S	G	S	P	W	T	L	A	T	Y	M	V	E	G	G	S	S	K	A	F
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		I	G	V	D	V	E	I	K	N	G	I	G	P	V	I	D	Q	P	I	R	S	L	A	D	I	E	K	L	G	Q	I	D	P	E	Q	D	V	P	Y	V	L	E	T	I	K	L	L	V	N	E	Q	L	.	N	V	P	L	I	G	F	S	G	A	P	F	T	L	A	S	Y	M	T	E	G	G	P	S	K	N	Y
Template Known Secondary structure		G	T							B	T	T	B				S	S				S						T																								T		.	S	S																				S			S	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	I	K	K	M	M	Y	A	D	P	Q	A	L	H	A	L	L	D	K	L	A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P
Query Conservation
Alig confidence																																																																												.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		N	K	T	K	A	F	M	Y	S	M	P	D	A	W	N	L	L	M	S	K	L	A	D	M	I	I	V	Y	V	K	A	Q	I	K	A	G	A	K	A	I	Q	I	F	D	S	W	V	G	A	L	N	Q	A	D	Y	R	T	Y	I	K	P	V	M	N	R	I	F	S	E	L	A	K	E	N	.	.	.	.	V	P
Template Known Secondary structure																																					T		S							T	T	G	G	G	S									T													T	T		.	.	.	.	S
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.					.	240
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	L	F	T	K	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	D	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		L	I	M	F	G	V	G	A	S	H	L	A	G	D	W	H	D	L	P	L	D	V	V	G	L	D	W	R	L	G	I	D	E	A	R	S	.	K	G	I	T	K	T	V	Q	G	N	L	D	P	S	I	L	L	A	P	W	E	V	I	E	Q	K	T	K	E	I	L	D	Q	G	M	E	S	D	G	F	I	F	N
Template Known Secondary structure							T	T		G	G	G						T	S	S		S						T	T	S								.	T	T			S						B		G	G	G	G	G	S																	T	T	S	S				B
Template Predicted Secondary structure																																						.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	H	G	I	H	Q	D	V	P	P	E	H	A	G	V	F	V	E	A	V	H	R	L	S	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	H	G	V	F	P	D	V	S	P	E	V	L	K	K	L	T	A	F	V	H	E	Y	S	Q	N
Template Known Secondary structure		B	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions