Job Description P29680 Confidence 51.18% Date Thu Jan 5 11:45:39 GMT 2012 Rank 175 Aligned Residues 93 % Identity 17% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.										.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.																	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence																													.																	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	.	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	.	.	.	.	.	.	.	.	.	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	.	.	.	.	.	.	.
Query Conservation																													.																	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Alig confidence																													.																	.	.	.	.	.	.	.	.	.												.	.								.	.	.	.	.	.	.
Template Conservation																																																																		.	.
Template Sequence		Y	E	T	S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	R	F	E	D	V	L	E	L	S	E	T	L	R	K	E	F	P	.	.	D	I	P	F	L	L	M	T	Y	Y	N	P	I	F
Template Known Secondary structure															T	T		S									S			T	T	S														T	T																		T	.	.	T	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	D	W	T	T	D	I	A	D	A	R	R	R
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	.	P	D	L	P	P	E	E	A	E	E	L
Template Known Secondary structure															T	T							.	T	T
Template Predicted Secondary structure																							.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions