Job Description P29680 Confidence 100.00% Date Thu Jan 5 11:45:39 GMT 2012 Rank 6 Aligned Residues 334 % Identity 39% Template c2ejaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 aquifex aeolicus Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	D	R	Y	L	R	A	L	L	R	Q	P	V	D	V	T	P	V	W	M	M	R	Q	A	G	R	Y	L	P	E	Y	K	A	T	R	A	Q	A	G	D	F	M	S	L	C	K	N	A	E	L	A	C	E	V	T	L	Q	P	L	R	R	Y	P	L	D	A	A	I	L	F	S	D	I	L	T	V	P	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	D	L	L	L	R	S	L	R	G	E	P	I	G	R	F	P	V	W	L	M	R	Q	A	G	R	Y	M	P	E	Y	R	K	I	R	N	R	V	K	N	F	L	E	L	C	K	N	V	D	L	A	T	E	I	S	L	L	P	L	K	I	L	G	V	D	A	I	I	I	F	S	D	I	L	V	P	L	E	P
Template Known Secondary structure											T	T				S	S			B			T	T		S	S	T	T	S								T	T		S	S																									S					S			T	T	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	L	G	L	Y	F	E	A	G	E	G	P	R	F	T	S	P	V	T	C	K	A	D	V	D	K	L	P	I	P	D	P	E	D	E	L	G	Y	V	M	N	A	V	R	T	I	R	R	E	L	K	G	E	V	P	L	I	G	F	S	G	S	P	W	T	L	A	T	Y	M	V	E	G	G	S	S	K	A	F
Query Conservation
Alig confidence															.	.	.	.																	.															.
Template Conservation															.	.	.	.																	.															.
Template Sequence		L	G	V	K	V	E	F	V	E	G	E	G	P	.	.	.	.	K	L	S	W	S	G	K	V	S	D	L	K	K	Y	D	P	.	S	Q	N	A	Y	V	Y	E	I	I	K	R	V	K	.	E	A	Q	D	E	V	P	V	I	G	F	A	G	A	P	F	T	L	L	S	Y	L	I	E	G	G	A	S	K	D	F
Template Known Secondary structure		G	T							T	T	T			.	.	.	.						S		G	G	G	S					G	.	G	G	G												.					S	S																		T	T	T			S	S
Template Predicted Secondary structure															.	.	.	.																	.															.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	I	K	K	M	M	Y	A	D	P	Q	A	L	H	A	L	L	D	K	L	A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P
Query Conservation
Alig confidence																																																																															.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		K	S	T	K	L	F	M	W	E	N	P	K	E	Y	K	R	L	M	D	I	L	T	E	T	V	L	A	Y	L	K	E	Q	I	K	A	G	A	D	V	V	Q	I	F	D	S	W	V	N	N	L	S	L	E	D	Y	G	E	Y	V	Y	P	Y	V	N	Y	L	I	S	E	L	K	D	F	S	D	T	P	.	.	.
Template Known Secondary structure																																				T	T		S							T	T	G	G	G	S									T																	S		.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	L	F	T	K	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	D	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N
Query Conservation
Alig confidence																																										.	.
Template Conservation																																										.	.
Template Sequence		V	I	Y	F	F	R	G	S	S	S	F	I	D	L	A	V	D	Y	R	A	D	A	L	S	V	D	W	S	V	D	I	P	E	L	F	K	I	Y	D	K	.	.	G	F	Q	G	N	L	E	P	A	V	L	Y	A	S	E	E	V	I	E	E	K	T	L	G	L	L	R	R	I	P	V	K	T	R	Y	V	F	N
Template Known Secondary structure							S	S									T	T	S			S						T	T	S										S	S	.	.						B		G	G	G	G	G	S														T	T				S	S	S			B
Template Predicted Secondary structure																																										.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	H	G	I	H	Q	D	V	P	P	E	H	A	G	V	F	V	E	A	V	H	R	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	H	G	L	A	P	D	M	E	L	E	K	V	K	Y	L	V	D	L	V	K	S	F	P
Template Known Secondary structure		B	S	S				T	T	S														T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions