Job Description P29680 Confidence 85.66% Date Thu Jan 5 11:45:39 GMT 2012 Rank 79 Aligned Residues 149 % Identity 13% Template c1zcoA_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase Resolution 2.25 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A
Query Conservation
Alig confidence																		.																																					.	.	.	.	.																			.
Template Conservation																		.																																					.	.	.	.	.																			.
Template Sequence		E	Q	I	M	K	V	A	E	F	L	A	E	V	G	I	K	.	V	L	R	G	G	A	F	K	P	R	T	S	P	Y	S	F	Q	G	Y	G	E	K	A	L	R	W	M	R	E	A	A	D	E	Y	G	L	.	.	.	.	.	V	T	V	T	E	V	M	D	T	R	H	V	E	L	V	A	K	Y	.	S	D	I
Template Known Secondary structure														T	T			.					B	S	S				S	S	T	T	S					T															T		.	.	.	.	.									G	G	G								.		S
Template Predicted Secondary structure																		.																																					.	.	.	.	.																			.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.
		267	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.
Predicted Secondary structure						.	.	.	.																																																																						.
Query SS confidence						.	.	.	.																																																																						.
Query Sequence		L	G	L	D	.	.	.	.	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D	V	P	P	E	H	A	G	.	V	F
Query Conservation						.	.	.	.																																																																						.
Alig confidence						.	.	.	.																								.	.	.	.	.											.																															.
Template Conservation																																	.	.	.	.	.											.
Template Sequence		L	Q	I	G	A	R	N	S	Q	N	F	E	L	L	K	E	V	G	K	V	E	N	P	V	L	L	K	R	G	M	G	.	.	.	.	.	N	T	I	Q	E	L	L	Y	S	A	.	E	Y	I	M	A	Q	G	N	E	N	V	I	L	C	E	R	G	I	R	T	F	E	T	A	T	R	F	T	L	D	I	S	A
Template Known Secondary structure						G	G	G	T	T									T	T	S	S	S								T	T	.	.	.	.	.											.					T	T	T											B			S			S	S	S	S	B			T	T
Template Predicted Secondary structure																																	.	.	.	.	.											.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		342	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	V	H	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	V	V	K	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions