Job Description P29680 Confidence 99.20% Date Thu Jan 5 11:45:39 GMT 2012 Rank 13 Aligned Residues 208 % Identity 11% Template c1ypxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative vitamin-b12 independent methionine synthase family PDBTitle: crystal structure of the putative vitamin-b12 independent methionine2 synthase from listeria monocytogenes, northeast structural genomics3 target lmr13 Resolution 2.60 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	N	A	V	R	T	I	R	R	E	L	K	G	E	V	P	L	I	G	F	S	G	S	P	W	T	L	A	T	Y	M	V	E	G	G	S	S	K	A	F	T	V	I	K	K	M	M	Y	A	D	P	Q	A	L	H	A	L	L	D	K	L	A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	E	D	F	I	F	L	K	E	A	V	G	D	N	H	V	A	K	Q	T	I	P	S	P	A	X	L	H	Y	R	G	D	I	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	Y	L	D	D	A	E	K	F	A	N	D	L	A	T	A	Y	Q	K	A	I	Q	A	F	Y	D	A	G	C	R	Y
Template Known Secondary structure															S	S	S									T											S	.	.	.	.	.	.	.	.	.	.	.	.																												T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.													.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270		.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																																			.												.											.
Query SS confidence														.	.	.	.	.	.																																			.												.											.
Query Sequence		V	M	I	F	D	T	W	G	G	V	L	T	.	.	.	.	.	.	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	.	K	G	G	G	Q	W	L	E	A	M	A	.	E	T	G	C	D	A	L	G	L	D	.	W	T	T	D
Query Conservation														.	.	.	.	.	.																																			.												.											.
Alig confidence														.	.	.	.	.	.																											.	.	.	.					.												.											.
Template Conservation																																														.	.	.	.
Template Sequence		L	Q	L	D	D	T	S	W	S	Y	L	C	S	D	E	G	F	D	P	E	T	L	Q	E	T	Y	K	N	L	I	N	E	A	I	K	H	K	P	A	D	X	V	I	T	.	.	.	.	X	H	I	C	R	G	G	Y	G	P	V	A	E	T	L	F	G	K	L	N	I	D	G	F	F	L	E	Y	D	N	E	R
Template Known Secondary structure												T	T	S					S	T	T	T													T	T	T			T	T					.	.	.	.									S	G	G	G					T	T				S								S
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																																															.
Query SS confidence											.																																															.
Query Sequence		I	A	D	A	R	R	R	V	G	.	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	.	H	Q	D	V	P	P	E	H	A	G	V	F	V	E	A	V	H	R	L
Query Conservation											.																																															.
Alig confidence											.																																	.														.
Template Conservation																																												.
Template Sequence		F	A	P	L	K	Y	V	T	R	P	D	L	K	I	V	L	G	L	I	T	S	K	T	G	E	E	D	E	A	A	I	K	A	R	I	E	E	A	S	E	I	V	.	P	L	S	Q	L	R	L	S	P	Q	C	G	F	A	T	E	E	E	Q	W	D	K	L	R	Y	V	V	R	L	A	N	D	I
Template Known Secondary structure				T	T						T	T										S	S	S					S														S	.		G	G	G						S	S
Template Predicted Secondary structure																																												.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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