Job Description P29680 Confidence 33.16% Date Thu Jan 5 11:45:39 GMT 2012 Rank 246 Aligned Residues 139 % Identity 14% Template c1ydoC_ PDB info PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. Resolution 2.71 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.																				.
Template Conservation																																							.	.	.	.	.	.	.	.	.																				.
Template Sequence		T	E	D	K	I	T	W	I	N	Q	L	S	R	T	G	L	S	Y	I	E	I	T	S	F	V	H	P	K	W	I	P	A	L	R	D	A	I	.	.	.	.	.	.	.	.	.	D	V	A	K	G	I	D	R	E	K	G	V	T	Y	A	A	L	V	P	.	N	Q	R	G	L	E	N	A	L	E	G	G	I	N
Template Known Secondary structure														T	T	T		S								S		T	T	T		G	G	G	T	T			.	.	.	.	.	.	.	.	.						S				T	T									.	S											T		S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.						320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		A	L	G	L	D	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	.	.	.	.	.	G	H	V	F	N	L	G	H	G	I	H	Q	D	V	P	P	E	H	A	G	V
Query Conservation																																																								.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	C	V	F	X	S	A	S	E	T	H	N	R	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	K	S	T	S	E	S	L	H	I	L	K	Q	V	N	N	D	A	Q	K	A	N	L	T	T	R	A	Y	L	S	T	V	F	G	C	P	Y	E	K	D	V	P	I	E	Q	V	I	R
Template Known Secondary structure									S	S						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S																			T	T										T	T		B	T	T	T	B
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		341	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	E	A	V	H	R	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	E	A	L	F	E	F	G
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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