Job Description P29680 Confidence 75.77% Date Thu Jan 5 11:45:39 GMT 2012 Rank 116 Aligned Residues 150 % Identity 13% Template c1vliA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution Resolution 2.38 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.					.	.	220						.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.
Predicted Secondary structure																												.						.	.	.	.				.	.	.	.	.																																		.
Query SS confidence																												.						.	.	.	.				.	.	.	.	.																																		.
Query Sequence		K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	.	V	L	T	G	R	.	.	.	.	D	Y	Q	.	.	.	.	.	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	G	G	G	.	Q	W
Query Conservation																												.						.	.	.	.				.	.	.	.	.																																		.
Alig confidence																												.						.	.	.	.				.	.	.	.	.																			.	.	.	.	.	.										.
Template Conservation																																																																.	.	.	.	.	.
Template Sequence		D	Q	A	F	A	L	I	D	A	A	A	E	A	G	A	D	A	V	K	F	Q	X	F	Q	A	D	R	X	Y	Q	K	D	P	D	V	S	I	F	S	L	V	Q	S	X	E	X	P	A	E	W	I	L	P	L	L	D	Y	C	R	E	K	Q	.	.	.	.	.	.	V	I	F	L	S	T	V	C	D	E	G	S
Template Known Secondary structure															T		S							B		G	G	G	G	T	S											G	G	G	B	S	S		G	G	G											T	T	.	.	.	.	.	.						B			S
Template Predicted Secondary structure																																																																.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		L	E	A	M	A	E	T	G	C	D	A	L	G	L	D	.	.	.	.	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																							.	.	.	.	.	.																		.
Template Conservation																																											.	.	.	.	.	.																		.
Template Sequence		A	D	L	L	Q	S	T	S	P	S	A	F	K	I	A	S	Y	E	I	N	H	L	P	L	L	K	Y	V	A	R	L	N	R	P	X	I	F	S	T	A	G	.	.	.	.	.	.	A	E	I	S	D	V	H	E	A	W	R	T	I	R	A	E	G	.	N	N	Q	I	A	I	X	H	C	V	A	K	Y	P	A
Template Known Secondary structure							T	T			S						G	G	G	T	T										T	T		S							T	T	.	.	.	.	.	.															T	T	T	.											S	S	S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.																		.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	P	P	E	H	A	G	V	F	V	E	A	V	H	R	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	E	Y	S	N	L	S	V	I	P	X	L	A	A	A	F	P
Template Known Secondary structure			G	G	G			T	T									S	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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