Job Description P75823 Confidence 100.00% Date Thu Jan 5 12:14:38 GMT 2012 Rank 3 Aligned Residues 329 % Identity 17% Template d2v1pa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 1.9

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		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		M	I	D	L	R	S	D	T	V	T	R	P	.	S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	K	E	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C	E	R	G	E	E	Y	I	V	G
Query Conservation														.
Alig confidence														.										.	.	.
Template Conservation																								.	.	.
Template Sequence		F	I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	.	R	G	D	E	A	F	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L
Template Known Secondary structure		S				S			T	T		S										T	T	.	.	.	S					S	S	S															T			S							S	S	T	T	T
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.											.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.
Predicted Secondary structure							.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																																		.
Query SS confidence							.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																																		.
Query Sequence		Q	A	A	H	N	.	.	.	.	.	.	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	.	.	.	.	.	.	.	.	.	.	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	.	G	K
Query Conservation							.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																																		.
Alig confidence							.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation
Template Sequence		D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q
Template Known Secondary structure			T	T	T						S	S												T	T							B		T	T	T	T		T	T	S			T	T	T	T		B														G	G	G								S	S	B		G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.													.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		V	L	P	R	E	Y	L	K	E	A	W	E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	.	V	G
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K
Template Known Secondary structure																		T	T								T	T													G	G	G	T	T	S										G	G	G		S						S	S	S	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.								.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																			.	.	.	.	.	.	.																																																								.
Query SS confidence																			.	.	.	.	.	.	.																																																								.
Query Sequence		N	R	D	Y	I	K	R	A	I	R	W	R	K	M	T	G	G	.	.	.	.	.	.	.	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	M	R	Q	D	T	N	M	L	F	V	R	.
Query Conservation																			.	.	.	.	.	.	.																																																								.
Alig confidence																			.	.	.	.	.	.	.																																													.											.
Template Conservation																																																																						.
Template Sequence		D	D	S	F	F	D	V	Y	T	E	C	R	T	L	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	Q	.	Q	A	G	G	H	A	A	F	V	D	A
Template Known Secondary structure		S	G	G	G													T	T	S	S																					T	T																						T	T				.				S	S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.
											282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.																				.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence		.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		.	.	.	.	.	.	.	.	.	V	G	E	E	N	A	A	A	L	G	E	Y	M	K	A	R	N	V	L	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	P	I	V	R	L	V	T	H	L	D	V	.	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A
Query Conservation		.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E
Template Known Secondary structure					S	T	T	S		G	G	G																						S						B		T	T	T		S	B				S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		333
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		445

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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