Job Description P75823 Confidence 99.96% Date Thu Jan 5 12:14:38 GMT 2012 Rank 102 Aligned Residues 306 % Identity 15% Template d2fnua1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.50

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		D	L	R	S	D	T	V	T	R	P	S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	K	E	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	.	.	.	C	E	R	G	E	E	Y	I	V	G
Query Conservation																																																																					.	.	.
Alig confidence					.	.	.	.	.	.	.	.										.																																															.	.	.
Template Conservation					.	.	.	.	.	.	.	.										.
Template Sequence		C	L	D	.	.	.	.	.	.	.	.	K	E	D	K	K	A	V	L	E	.	V	L	N	S	K	Q	L	T	Q	G	K	R	S	L	L	F	E	E	A	L	C	E	F	L	G	V	K	H	A	L	V	F	N	S	A	T	S	A	L	L	T	L	Y	R	N	F	S	E	F	S	A	D	R	N	E	I	I	T	T
Template Known Secondary structure					.	.	.	.	.	.	.	.										.			T	S	S			S	S	S															T		S						S													S	S				T	T	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.										.
Template SS confidence
		10	.	.									.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y	L	K	E	A	W	E	F	T	R	E	R
Query Conservation
Alig confidence									.	.	.																																		.	.	.	.	.	.	.																	.	.	.
Template Conservation									.	.	.																																		.	.	.	.	.	.	.																	.	.	.
Template Sequence		P	I	S	F	V	A	T	.	.	.	A	N	M	L	L	E	S	G	Y	T	P	V	F	A	G	I	K	N	D	G	N	I	D	E	L	A	L	E	K	L	I	N	E	.	.	.	.	.	.	.	R	T	K	A	I	V	S	V	D	Y	A	G	K	S	V	E	.	.	.	V	E	S	V	Q	K	L	C	K	K	H
Template Known Secondary structure		S	S	S		T			.	.	.							T	T								B		T	T	S	S	B		G	G	G	S	G	G	G			T	.	.	.	.	.	.	.	T									G	G	G					.	.	.
Template Predicted Secondary structure									.	.	.																																		.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		81	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120								.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220																.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	M	T
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		S	L	S	F	L	S	D	S	S	H	A	L	G	S	E	Y	Q	N	K	K	V	G	G	F	A	.	.	L	A	S	V	F	S	F	H	A	I	K	P	I	T	T	A	E	G	G	A	V	V	T	N	D	S	E	L	H	E	K	M	K	L	F	R	S	H	G	M	L	K	K	D	F	F	E	G	E	V	K	S	I
Template Known Secondary structure		T								T	T		T	T				T	T			T	T	S	S	S	.	.	S								T	T	S	S	S			S	S							S												T	B	T	T				S	S	S	S					S	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.											.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	M	R	Q	D	T	N	.	.	.	.	.	.	.	.	.	.	M	L	F	V	R	V	G	E	E	N	A	A	A	L	G	E	Y	M
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	H	N	F	R	L	N	E	I	Q	S	A	L	G	L	S	Q	L	K	K	A	P	F	L	M	Q	K	R	E	E	A	A	L	T	Y	D	R	I	F	K	D	N	P	Y	F	T	P	L	H	P	L	L	K	D	K	S	S	N	H	L	Y	P	I	L	M	H	Q	K	F	F	T	C	K	K	L	I	L	E	S	L
Template Known Secondary structure				B																T	T																				T	T		S	S				S	G	G	G		S	S					S								G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.																												.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	R	N	V	L	I	N	A	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	K	R	G	I	L	A	Q	V	H	Y	K	P	I	Y	Q	Y	Q	L	Y	Q	Q	L	F	N	T	A	P	L	K	S	A	E	D	F	Y	H	A	E	I	S	L	P	C	H	A	N	L	N	L	E	S	V	Q	N	I	A	H	S	V	L	K	T	F	E
Template Known Secondary structure				T	T				B						G	G	G	S																													T	T
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions