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Job DescriptionP75823
Confidence99.94%DateThu Jan 5 12:14:38 GMT 2012
Rank161Aligned Residues313
% Identity13%Templated2c0ra1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution1.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPT. . . . . . . . . . . . VNALQDYAAELSGKEA. . . . AIFLPTGTQANLV
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Template Sequence  AYNF. NAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAM
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   5... .10.........20.........30.........40.........50.........60.........70.........80...
 
   65....70.........80.........90.........100.........110.........120.........130.........140....
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Query Sequence  ALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVL
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Template Sequence  IPMNFLKEGQTANYVMTGSWA. SKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQD. . . . . NAAYLHLTSNETIEGA
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S.S

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   84.....90.........100.... .....110.........120.........130.........140. ........150.......
 
   145....150.........160.........170.........180.........190.........200.........210.....
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Query Sequence  PREYLKEAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIK. . . . . . . . .
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Template Sequence  QFK. . . . . . AFPDTGSVPLIGDMSSDILSRPFD. . . . . . . LNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTM
Template Known Secondary structure 
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   158.160 .........170.........180.... .....190.........200.........210.........220....
 
   216...220.........230.........240.... .....250.........260...... ...270.... .....280..
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Query Sequence  . . . . . . RAIRWRKMTGGGMRQSGILAAAGIYALKN. NVARLQEDHDNAAWMAEQLREA. GADVMRQD. . . . . TNMLFVRV
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Template Sequence  LRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRL
Template Known Secondary structure  G
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   225....230.........240.........250.........260.........270.........280.........290.........300....
 
   283. .....290.........300...... ...310.........320.........330...
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Query Sequence  GE. ENAAALGEYMKARNVLINASPI. . . . VRLVTHLDVSREQLAEVAAHWRAFLAR
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Template Sequence  ASEELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRS
Template Known Secondary structure  S
TTS
B

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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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