Phyre 2 alignment of P75823 with d2aeua1

Job Description P75823
Confidence 99.93% Date Thu Jan 5 12:14:38 GMT 2012

Rank 183 Aligned Residues 309

% Identity 14% Template d2aeua1

SCOP info PLP-dependent transferase-like PLP-dependent transferases SelA-like

Resolution 1.70

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence	M	I	D	L	R	S	D	T	V	T	R	P	S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	.	.	.	K	E	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C	E	R	G	E	E	Y	I
Query Conservation																																																	.	.	.
Alig confidence																							.	.	.	.	.																						.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence	L	Y	D	L	S	G	L	S	G	G	F	L	I	D	E	K	D	K	A	L	L	N	.	.	.	.	.	T	Y	I	G	S	S	Y	F	A	E	K	V	N	E	Y	G	L	K	H	L	G	G	D	E	N	D	K	C	V	G	F	N	R	T	S	S	A	I	L	A	T	I	L	A	L	K	P	K	K	V	I	H	Y
Template Known Secondary structure					S	S																T	.	.	.	.	.	S	T	T																		T			T	T							S	S															S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

	78	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence	V	G	Q	.	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y	L	K	E	A	W	E	F	T
Query Conservation				.
Alig confidence				.							.	.	.																.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation											.	.	.																.	.	.	.	.	.	.													.	.	.	.	.	.
Template Sequence	L	P	E	L	P	G	H	P	S	I	.	.	.	E	R	S	C	K	I	V	N	A	K	Y	F	E	S	D	.	.	.	.	.	.	.	K	V	G	E	I	L	N	K	I	D	K	D	.	.	.	.	.	.	T	L	V	I	I	T	G	S	T	M	D	L	K	V	I	E	L	E	N	F	K	K	V	I	N	T	A
Template Known Secondary structure		S	S	S	S			T			.	.	.							T	T							S	.	.	.	.	.	.	.							T	T			T	T	.	.	.	.	.	.								B		T	T	S		B
Template Predicted Secondary structure											.	.	.																.	.	.	.	.	.	.													.	.	.	.	.	.
Template SS confidence
	105	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

	157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	R	K	M	T	G	G	G	M	R	Q	S	G	I	L	A	A
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence	K	N	K	E	A	I	V	F	V	D	D	A	S	G	A	R	V	R	L	L	F	N	Q	P	.	P	A	L	K	L	G	A	D	L	V	V	T	S	T	D	K	L	M	E	G	P	R	G	G	L	L	A	G	K	K	E	L	V	D	K	I	Y	I	E	G	T	K	F	G	L	E	A	Q	P	P	L	L	A	G	I
Template Known Secondary structure				T								T	T								T	T			.						T		S						T	T	S	S	S	S	S		S																				T	T	T		B
Template Predicted Secondary structure																									.
Template SS confidence
	169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

	237	.	.	240	.	.	.	.	.	.	.	.	.	250	.												.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.								.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Query Sequence	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	.	.	.	.	.	.	.	.	.	.	.	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	M	R	Q	D	T	N	M	L	F	V	R	V	G	E	E	N	A	.	.	.	.	.	.	.	A	A	L	G	E	Y	M	K	A	R	N
Query Conservation																.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence	Y	R	A	L	K	N	F	N	L	E	R	I	R	K	A	F	E	R	A	K	N	F	D	L	S	K	I	E	K	L	N	K	E	L	K	A	I	D	D	N	I	N	I	V	Y	E	R	T	P	T	G	F	V	I	K	R	V	Y	K	D	D	T	I	N	I	K	K	L	I	E	I	G	F	N	L	L	K	N	Y	G
Template Known Secondary structure																																			T	T	T		T	T									S	S									S	S
Template Predicted Secondary structure
Template SS confidence
	248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

	299	300	.	.	.	.								.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure							.	.	.	.	.	.	.													.
Query SS confidence							.	.	.	.	.	.	.													.
Query Sequence	V	L	I	N	A	S	.	.	.	.	.	.	.	P	I	V	R	L	V	T	H	L	D	V	S	.	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L
Query Conservation							.	.	.	.	.	.	.													.
Alig confidence							.	.	.	.	.	.	.													.
Template Conservation
Template Sequence	I	I	T	I	T	V	A	G	M	P	G	A	S	K	S	L	R	I	D	L	T	S	R	D	A	E	R	I	D	D	N	Y	I	I	K	A	I	V	E	S	I
Template Known Secondary structure				S	T	T	S	S	S		S	S			S					T	T	S	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
	328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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