Job Description P75823 Confidence 99.92% Date Thu Jan 5 12:14:38 GMT 2012 Rank 195 Aligned Residues 307 % Identity 19% Template d1wyub1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70										.	.	.	.	.
Predicted Secondary structure																						.	.	.						.	.	.	.																.																			.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.						.	.	.	.																.																			.	.	.	.	.	.	.	.	.
Query Sequence		S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	D	.	.	.	D	P	T	V	N	.	.	.	.	A	L	Q	D	Y	A	A	E	L	S	G	K	E	A	A	.	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C	.	.	.	.	.	.	.	.	.	E	R	G	E	E
Query Conservation																						.	.	.						.	.	.	.																.																			.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.						.	.	.	.																.																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	P	K	L	H	E	E	A	A	R	L	F	A	D	L	H	P	Y	Q	D	P	R	T	A	Q	G	A	L	R	L	M	W	E	L	G	E	Y	L	K	A	L	T	G	M	D	A	I	T	L	E	P	A	A	G	A	H	G	E	L	T	G	I	L	I	I	R	A	Y	H	E	D	R	G	E	G	R	T	R	R	V
Template Known Secondary structure												T	T	S	S			T	T	S		G	G	G																				T		S							S	S																			T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y	L	K	E	A	W	E	F
Query Conservation
Alig confidence													.	.	.																																		.	.	.	.	.	.	.
Template Conservation													.	.	.																																		.	.	.	.	.	.	.
Template Sequence		V	L	V	P	D	S	A	H	G	S	N	.	.	.	P	A	T	A	S	M	A	G	Y	Q	V	R	E	I	P	S	G	P	E	G	E	V	D	L	E	A	L	K	R	E	L	G	P	.	.	.	.	.	.	.	H	V	A	A	L	M	L	T	N	P	N	T	L	G	L	F	E	R	R	I	L	E	I	S	R	L
Template Known Secondary structure						T	T	S		T			.	.	.							T	T								B		T	T	S	S	B										S	T	.	.	.	.	.	.	.	T								S	S		T	T	S				T	T
Template Predicted Secondary structure													.	.	.																																		.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.								.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200							.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	.	.	.	.	.	.	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.																						.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		C	K	E	A	G	V	Q	L	Y	Y	D	G	A	N	L	N	A	I	M	G	.	.	.	.	W	A	R	P	G	D	M	G	F	D	V	V	H	L	N	L	H	K	T	F	T	V	P	H	G	G	G	G	P	G	S	G	P	V	G	V	K	A	H	L	A	P	Y	L	P	V	P	L	V	E	R	G	E	E	G	F
Template Known Secondary structure						T							G	G	G	G	G	G	T	T	T	.	.	.	.	T							T		S						T	T	T	T	T					T	T	S											G	G	G	G	G	G			S							S	S
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
											217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																								.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																								.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	A	I	R	W	R	K	M	T	G	G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	M	.	.	.	R	Q	D	T	N	M	L	F	V	R	V	G	E
Query Conservation		.	.	.	.	.	.	.	.	.																																																								.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																								.	.	.
Template Conservation
Template Sequence		Y	L	D	F	D	R	P	K	S	I	G	R	V	R	S	F	Y	G	N	F	L	A	L	V	R	A	W	A	Y	I	R	T	L	G	L	E	G	L	K	K	A	A	A	L	A	V	L	N	A	R	Y	L	K	E	L	L	K	E	K	G	Y	R	V	P	Y	D	G	P	S	M	H	E	F	V	A	Q	P	P	E	G
Template Known Secondary structure								T	T					S	S	S	T	T	S																																									T	T		B		S	S		S	S			S					B		S	T	T
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.								.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		E	N	A	A	A	L	G	E	Y	M	K	A	R	N	V	L	I	N	.	.	.	.	.	.	.	A	S	P	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A	R
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	A	L	D	L	A	K	G	L	L	E	L	G	F	H	P	P	T	V	Y	F	P	L	I	V	K	E	A	L	M	V	E	P	T	E	T	E	A	K	E	T	L	E	A	F	A	E	A	M	G	A	L	L	K	K
Template Known Secondary structure														T	T							S		S	T	T	S	T	T								T	T	S																	T	S
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions