Job Description P75823 Confidence 99.97% Date Thu Jan 5 12:14:38 GMT 2012 Rank 48 Aligned Residues 331 % Identity 16% Template d1vefa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.35

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		1	.	.	.	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure														.	.	.	.																				.	.	.																				.	.																					.
Query SS confidence														.	.	.	.																				.	.	.																				.	.																					.
Query Sequence		M	I	D	L	R	S	D	T	V	T	R	P	.	.	.	.	S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	.	.	.	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	K	E	.	.	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C	.
Query Conservation														.	.	.	.																				.	.	.																				.	.																					.
Alig confidence														.	.	.	.																				.	.	.																				.	.																					.
Template Conservation
Template Sequence		Y	I	D	C	V	G	G	Y	G	V	A	N	L	G	H	G	N	P	E	V	V	E	A	V	K	R	Q	A	E	T	L	M	A	M	P	Q	T	L	P	T	P	M	R	G	E	F	Y	R	T	L	T	A	I	L	P	P	E	L	N	R	V	F	P	V	N	S	G	T	E	A	N	E	A	A	L	K	F	A	R	A
Template Known Secondary structure					S	S					T		T	T		B	T																				T	T	S															T	S		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
				71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.
Predicted Secondary structure		.	.																																																																								.
Query SS confidence		.	.																																																																								.
Query Sequence		.	.	E	R	G	E	E	Y	I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	.	K	V	L	P	R	E
Query Conservation		.	.																																																																								.
Alig confidence		.	.																																																																								.
Template Conservation
Template Sequence		H	T	G	R	K	K	F	V	A	A	M	R	G	F	S	G	R	T	M	G	S	L	S	V	T	W	E	P	K	Y	R	E	P	F	L	P	L	V	E	P	V	E	F	I	P	Y	N	D	V	E	A	L	K	R	A	V	D	E	E	T	A	A	V	I	L	E	P	V	Q	G	E	G	G	V	R	P	A	T	P	E
Template Known Secondary structure				S								T	T					S	S						T								G	G	G		S		S	S							T	T											T	T								S			T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	K	E	A	W	E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	R	K	M	T	G	G	G
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		F	L	R	A	A	R	E	I	T	Q	E	K	G	A	L	L	I	L	D	E	I	Q	T	G	M	G	R	T	G	K	R	F	A	F	E	H	F	G	I	V	P	D	I	L	T	L	A	K	A	L	G	.	G	G	V	P	L	G	V	A	V	M	R	E	E	V	A	R	S	M	P	K	G	G	H	G	T	T	F	G
Template Known Secondary structure														T								T	T	T	T	T	T	T	T	S	S	S	S	T					T				S						G	G	G	G	.	T	T	S	S													T	S		T	T	S	S			S	S	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	.	.	.	M	R	Q	D	T	N	M	L	F	V	R	V	G	E	E	N	A	A	A	L	G	E	Y	M	K	A	R	N	V	L	I	N	A	S
Query Conservation																																													.	.	.
Alig confidence																																													.	.	.
Template Conservation
Template Sequence		G	N	P	L	A	M	A	A	G	V	A	A	I	R	Y	L	E	R	T	R	L	W	E	R	A	A	E	L	G	P	W	F	M	E	K	L	R	A	I	P	S	P	K	I	R	E	V	R	G	M	G	L	M	V	G	L	E	L	K	E	K	A	A	P	Y	I	A	R	L	E	K	E	H	R	V	L	A	L	Q	A
Template Known Secondary structure		T																			T	T																	T	S			T	T								T	T							S	S		S																		S
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		305			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		P	.	.	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		G	P	T	V	I	R	F	L	P	P	L	V	I	E	K	E	D	L	E	R	V	V	E	A	V	R	A	V	L	A
Template Known Secondary structure		S	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions