Return to main results Retrieve Phyre Job Id

Job DescriptionP75823
Confidence99.91%DateThu Jan 5 12:14:38 GMT 2012
Rank212Aligned Residues312
% Identity20%Templated1bj4a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20 .........30.........40 .........50. ..... ...60.........70..
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Query Sequence  TRPSRAMLEAM. . . . . . . . MAAPVGDDVYGDDPTVNALQ. . . . DYAAELSGKEA. AIFLP. . . . TGTQANLVALLSHCER
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Template Sequence  NFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEP
Template Known Secondary structure 



TSGGGT



TTSSS

TT

TTT


SST
T
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   55....60.........70.........80.........90.........100.........110.........120.........130....
 
   73......80.........90 .........100.........110.........120.........130.........140....
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Query Sequence  GEEYIVGQAAHNYLFEAG. . . . . . . . GAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVL
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Template Sequence  HGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLF. . . . . HPKLIIAGTSCYSRNL
Template Known Secondary structure  T

GGGT

GGG

B
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B
TTT
SB
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   135....140.........150.........160.........170.........180.........190... ......200.........
 
   145....150.........160.........170.........180.........190.........200........
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Query Sequence  PREYLKEAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLV. . . . . . . . . . . . . . . .
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Template Sequence  E. . . YARLRKIADENGAYLMADMAHISGLVAAGVVPSPF. . EHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPATGKEI
Template Known Secondary structure 
...TT

GGGTTSS

GG..GT
SSSGGG


S

S
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   210 .........220.........230.........240..... ....250.........260.........270.........280....
 
   209210.........220.........230.........240.. .......250.........260.........270.. .......280...
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Query Sequence  . . GNRDYIKRAIRWRKMTGGGMRQSGILAAAGIYAL. KNNVARLQEDHDNAAWMAEQLREAGADVMR. . QDTNMLFVRVG
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Template Sequence  LYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLR
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TTTT

S

TTSTT
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   285....290.........300.........310.........320.........330.........340.........350.........360....
 
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Query Sequence  . . EENAAALGEYMKARNVLIN. . . . . . . . . . . ASPIVRLVTHLDVS. . . . REQLAEVAAHWRAFL
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Template Sequence  SKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGI
Template Known Secondary structure  GGT

TT


TT
S
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   365....370.........380.........390.........400.........410.........420.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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